RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SOBPA7XYQ1 873 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 TPP1O14773 563 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 AURKAO14965 403 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 CLPXO76031 633 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 METTL18O95568 372 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 ERVK-10P10266 1014 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 GNG2P59768 71 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 KLF10Q13118 480 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 KIZQ2M2Z5 673 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 IL23RQ5VWK5 629 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 OFCC1Q8IZS5 231 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 WDR41Q9HAD4 459 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 KLK14Q9P0G3 267 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 KIAA1522Q9P206 1035 aaPredicted RBP15.96■□□□□ 0.15
DHFR-201ENST00000439211 TLK1Q9UKI8 766 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 ATAD5Q96QE3 1844 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 SNTNA6NMZ2 147 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 KMOO15229 486 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 TGFB3P10600 412 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 YAP1P46937 504 aaKnown RBP15.96■□□□□ 0.15
DHFR-201ENST00000439211 ALDH3B2P48448 385 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 RAB39AQ14964 217 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 TEDDM1Q5T9Z0 273 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 SLC9A4Q6AI14 798 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 IQSEC1Q6DN90 963 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 DHRS4L2Q6PKH6 230 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 SLC22A16Q86VW1 577 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 DSELQ8IZU8 1212 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 EBNA1BP2Q99848 306 aaKnown RBP15.96■□□□□ 0.15
DHFR-201ENST00000439211 LPIN3Q9BQK8 851 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 CYP3A43Q9HB55 503 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 CCDC177Q9NQR7 707 aaPredicted RBP15.96■□□□□ 0.15
DHFR-201ENST00000439211 SIX4Q9UIU6 781 aa15.96■□□□□ 0.15
DHFR-201ENST00000439211 GAS2O43903 313 aaKnown RBP15.96■□□□□ 0.14
DHFR-201ENST00000439211 GSNP06396 782 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 F7P08709 466 aaPredicted RBP15.96■□□□□ 0.14
DHFR-201ENST00000439211 TFE3P19532 575 aaPredicted RBP15.96■□□□□ 0.14
DHFR-201ENST00000439211 TGM2P21980 687 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 SERPINB10P48595 397 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 SULT1E1P49888 294 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 PRKAA2P54646 552 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 ARPP19P56211 112 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 MGAT5BQ3V5L5 792 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 FAM91A1Q658Y4 838 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 MAP1SQ66K74 1059 aaPredicted RBP15.96■□□□□ 0.14
DHFR-201ENST00000439211 TNS4Q8IZW8 715 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 FIBCD1Q8N539 461 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 REPS2Q8NFH8 660 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 ZNF486Q96H40 463 aaPredicted RBP15.96■□□□□ 0.14
DHFR-201ENST00000439211 RANBP9Q96S59 729 aa15.96■□□□□ 0.14
DHFR-201ENST00000439211 C2CD4BA6NLJ0 364 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 TRDMT1O14717 391 aaKnown RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 PTPN7P35236 360 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 HNRNPFP52597 415 aaKnown RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 LSM3P62310 102 aaKnown RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 ZNF354CQ86Y25 554 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 ELMOD1Q8N336 334 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 TTC16Q8NEE8 873 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 FIG4Q92562 907 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 CDH19Q9H159 772 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 EFCAB1Q9HAE3 211 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 BFARQ9NZS9 450 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 SOWAHBA6NEL2 793 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 NADKO95544 446 aaPredicted RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 ZNF286BP0CG31 522 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 RPS12P25398 132 aaKnown RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 PCSK7Q16549 785 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 ATAD3BQ5T9A4 648 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 CCNYL1Q8N7R7 359 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 WDR83Q9BRX9 315 aaKnown RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 FETUBQ9UGM5 382 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 SLC15A5A6NIM6 579 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 C3orf70A6NLC5 250 aaPredicted RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 ARIH2O95376 493 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 BPGMP07738 259 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 RALBP11234 206 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 PTGS2P35354 604 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 SLC6A3Q01959 620 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 NFATC3Q12968 1075 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 PMS2P3Q13401 168 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 IKBKEQ14164 716 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 CCDC58Q4VC31 144 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 PPM1JQ5JR12 505 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 PCDH20Q8N6Y1 951 aaKnown RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 MAGEB5Q9BZ81 275 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 WDR12Q9GZL7 423 aaKnown RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 PDGFCQ9NRA1 345 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 PRPF19Q9UMS4 504 aaKnown RBP15.95■□□□□ 0.14
DHFR-201ENST00000439211 TNFSF13BQ9Y275 285 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 RNF11Q9Y3C5 154 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 SNX5Q9Y5X3 404 aa15.95■□□□□ 0.14
DHFR-201ENST00000439211 E7ESA3 106 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 STX16-NPEPL1H3BU86 382 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 SNAP91O60641 907 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 GLRA3O75311 464 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 CLIC3O95833 236 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 CDH1P12830 882 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 KCNJ11Q14654 390 aa15.94■□□□□ 0.14
DHFR-201ENST00000439211 PUS10Q3MIT2 529 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms