RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 F9P00740 461 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 CKBP12277 381 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 TAS2R39P59534 338 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 PPIDQ08752 370 aaKnown RBP15.76■□□□□ 0.11
SCARF1-203ENST00000434376 PAFAH1B3Q15102 231 aaKnown RBP15.76■□□□□ 0.11
SCARF1-203ENST00000434376 RABGAP1LQ5R372 815 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 PDPK2PQ6A1A2 396 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 NAPEPLDQ6IQ20 393 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 ULK2Q8IYT8 1036 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 TDRD5Q8NAT2 981 aaKnown RBP15.76■□□□□ 0.11
SCARF1-203ENST00000434376 PIP4K2CQ8TBX8 421 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 RMDN1Q96DB5 314 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 TMA16Q96EY4 203 aaKnown RBP15.76■□□□□ 0.11
SCARF1-203ENST00000434376 ECSITQ9BQ95 431 aa15.76■□□□□ 0.11
SCARF1-203ENST00000434376 DDX18Q9NVP1 670 aaKnown RBP15.76■□□□□ 0.11
SCARF1-203ENST00000434376 UTP6Q9NYH9 597 aaKnown RBP15.76■□□□□ 0.11
SCARF1-203ENST00000434376 GLDCP23378 1020 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 GRIA4P48058 902 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 MBLAC2Q68D91 279 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 OR7D4Q8NG98 312 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 KCTD13Q8WZ19 329 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 IGSF8Q969P0 613 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 PANX3Q96QZ0 392 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 RBBP8Q99708 897 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 ACBD6Q9BR61 282 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 ABCG8Q9H221 673 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 UXTQ9UBK9 157 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-203ENST00000434376 GIMAP2Q9UG22 337 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 FAM50BQ9Y247 325 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 COMMD10Q9Y6G5 202 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 A0A0D9SEW6 157 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 TBKBP1A7MCY6 615 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 STX16-NPEPL1H3BU86 382 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 RNASEH1O60930 286 aaKnown RBP15.75■□□□□ 0.11
SCARF1-203ENST00000434376 GABRB3P28472 473 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 CSE1LP55060 971 aaKnown RBP15.75■□□□□ 0.11
SCARF1-203ENST00000434376 RPS24P62847 133 aaKnown RBP15.75■□□□□ 0.11
SCARF1-203ENST00000434376 PIK3R6Q5UE93 754 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 BHLHA9Q7RTU4 235 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 RNF180Q86T96 592 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 HPS6Q86YV9 775 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 HDAC10Q969S8 669 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 SKA1Q96BD8 255 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 TUBB6Q9BUF5 446 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 FAM96AQ9H5X1 160 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 TRPC7Q9HCX4 862 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 MARCH2Q9P0N8 246 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 FAM8A1Q9UBU6 413 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 ZNF212Q9UDV6 495 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 CDY1Q9Y6F8 540 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 CHD7Q9P2D1 2997 aa15.75■□□□□ 0.11
SCARF1-203ENST00000434376 FAM95CA0A1B0GW59 222 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SLC1A2P43004 574 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 MAGEA3P43357 314 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 ABCE1P61221 599 aaKnown RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 NIPAL4Q0D2K0 466 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 XKR4Q5GH76 650 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 ARL13AQ5H913 290 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 FRMD8Q9BZ67 464 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 GLOD4Q9HC38 313 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 ARHGEF38Q9NXL2 777 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SIRPGQ9P1W8 387 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SLC7A8Q9UHI5 535 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 TRAFD1O14545 582 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 ADAM12O43184 909 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 HNRNPCL1O60812 293 aaKnown RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SERPINE1P05121 402 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 NUDT2P50583 147 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 PLIN5Q00G26 463 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 CDC16Q13042 620 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 MED21Q13503 144 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 MMEL1Q495T6 779 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SCIMPQ6UWF3 145 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 FSTL5Q8N475 847 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 DNAH14Q0VDD8 3507 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SIN3BO75182 1162 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SERPINB8P50452 374 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SP3Q02447 781 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 DYNC1I2Q13409 638 aaKnown RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 RSPO2Q6UXX9 243 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 MAVSQ7Z434 540 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 ZNF598Q86UK7 904 aaKnown RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 TRIM42Q8IWZ5 723 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 NT5C3BQ969T7 300 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 HIC2Q96JB3 615 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 TRAPPC9Q96Q05 1148 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 CPNE1Q99829 537 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 SEMA3CQ99985 751 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 PRDM5Q9NQX1 630 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-203ENST00000434376 ABCC13Q9NSE7 274 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 DCDC2Q9UHG0 476 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 ZNF180Q9UJW8 692 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 PTCH2Q9Y6C5 1203 aa15.74■□□□□ 0.11
SCARF1-203ENST00000434376 CBX4O00257 560 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 CA12O43570 354 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 NSUN2Q08J23 767 aaKnown RBP eCLIP15.73■□□□□ 0.11
SCARF1-203ENST00000434376 SLC12A1Q13621 1099 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 MARC1Q5VT66 337 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 MARK2Q7KZI7 788 aaKnown RBP15.73■□□□□ 0.11
SCARF1-203ENST00000434376 SATL1Q86VE3 508 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms