RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ZNF304Q9HCX3 659 aa6.27□□□□□ -1.41
USP54-206ENST00000433394 SPATS2LQ9NUQ6 558 aaKnown RBP6.27□□□□□ -1.41
USP54-206ENST00000433394 SLCO3A1Q9UIG8 710 aa6.27□□□□□ -1.41
USP54-206ENST00000433394 UTS2RQ9UKP6 389 aa6.27□□□□□ -1.41
USP54-206ENST00000433394 SESN1Q9Y6P5 492 aa6.27□□□□□ -1.41
USP54-206ENST00000433394 SYNDIG1LA6NDD5 238 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 AHCYL1O43865 530 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 NDUFS3O75489 264 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 NEURL1O76050 574 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 MLYCDO95822 493 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 MT-CYBP00156 380 aaPredicted RBP6.26□□□□□ -1.41
USP54-206ENST00000433394 IGLV2-14P01704 120 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 PORP16435 677 aaPredicted RBP6.26□□□□□ -1.41
USP54-206ENST00000433394 TMEM11P17152 192 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 SAT1P21673 171 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 MAPK4P31152 587 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 ICAM3P32942 547 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 ACTN2P35609 894 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 PBX3P40426 434 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 LMAN1P49257 510 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 NLRP5P59047 1200 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 NIPAL4Q0D2K0 466 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 ITGADQ13349 1161 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 ZSCAN23Q3MJ62 389 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 ZNF280DQ6N043 979 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 C16orf54Q6UWD8 224 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 LDLRAD3Q86YD5 345 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 CAMK1DQ8IU85 385 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 ADGRF2Q8IZF7 708 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 SLC25A41Q8N5S1 370 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 BOLLQ8N9W6 283 aaKnown RBP6.26□□□□□ -1.41
USP54-206ENST00000433394 CMASQ8NFW8 434 aaPredicted RBP6.26□□□□□ -1.41
USP54-206ENST00000433394 WIPF2Q8TF74 440 aaPredicted RBP6.26□□□□□ -1.41
USP54-206ENST00000433394 KAT2AQ92830 837 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 NUF2Q9BZD4 464 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 RIOX1Q9H6W3 641 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 BPIFA1Q9NP55 256 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 ASAH2Q9NR71 780 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 TMEM45AQ9NWC5 275 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 RPS6KA6Q9UK32 745 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 MKLN1Q9UL63 735 aa6.26□□□□□ -1.41
USP54-206ENST00000433394 EBAG9O00559 213 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 PRRG2O14669 202 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 LDLRAD4O15165 306 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 TGFB1I1O43294 461 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 PAGE4O60829 102 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 TFP02787 698 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 TUBB4AP04350 444 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 PRKCGP05129 697 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 RARGP13631 454 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 EPHB2P29323 1055 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 CDAP32320 146 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 TGFB2P61812 414 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 FOXF2Q12947 444 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 OLIG2Q13516 323 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 PGM5Q15124 567 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 RNPS1Q15287 305 aaKnown RBP6.25□□□□□ -1.41
USP54-206ENST00000433394 DUSP28Q4G0W2 176 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 SYTL3Q4VX76 610 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 PLEKHS1Q5SXH7 462 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 TXNDC8Q6A555 127 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 CES5AQ6NT32 575 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 SZRD1Q7Z422 152 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 SERPINA11Q86U17 422 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 ZCCHC9Q8N567 271 aaKnown RBP6.25□□□□□ -1.41
USP54-206ENST00000433394 SGCDQ92629 289 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 SH2D3AQ9BRG2 576 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 PIMREGQ9BSJ6 248 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
USP54-206ENST00000433394 INTS6Q9UL03 887 aaKnown RBP6.25□□□□□ -1.41
USP54-206ENST00000433394 KIR2DS5A0A0G2JLQ3 304 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 KIR2DS3K7RE56 304 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 ZNF500O60304 480 aaPredicted RBP6.24□□□□□ -1.41
USP54-206ENST00000433394 ATP2C2O75185 946 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 SLC25A12O75746 678 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 CLTBP09497 229 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 MYZAPP0CAP1 466 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 NHLRC4P0CG21 123 aaPredicted RBP6.24□□□□□ -1.41
USP54-206ENST00000433394 TFPIP10646 304 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 PROZP22891 400 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 MCM3P25205 808 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 CENPAP49450 140 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 CDH8P55286 799 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 TFAP4Q01664 338 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 ID2Q02363 134 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 TCTN1Q2MV58 587 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 ZNF362Q5T0B9 420 aaPredicted RBP6.24□□□□□ -1.41
USP54-206ENST00000433394 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 MEX3CQ5U5Q3 659 aaKnown RBP6.24□□□□□ -1.41
USP54-206ENST00000433394 KIAA1614Q5VZ46 1190 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 GPR139Q6DWJ6 353 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 DBX2Q6ZNG2 339 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 CNGA4Q8IV77 575 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 WDTC1Q8N5D0 677 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 PGAM5Q96HS1 289 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 TMEM68Q96MH6 324 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 SEMA4CQ9C0C4 833 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 TASP1Q9H6P5 420 aa6.24□□□□□ -1.41
USP54-206ENST00000433394 PNRC2Q9NPJ4 139 aaKnown RBP6.24□□□□□ -1.41
USP54-206ENST00000433394 SMYD2Q9NRG4 433 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms