RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SERINC3Q13530 473 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 XKR4Q5GH76 650 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 NEK5Q6P3R8 708 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MFSD7Q6UXD7 560 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 KCNMB4Q86W47 210 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ARL10Q8N8L6 244 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RAPGEF5Q92565 580 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 EME1Q96AY2 570 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 HIC2Q96JB3 615 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MARK4Q96L34 752 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MED10Q9BTT4 135 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PDZD7Q9H5P4 517 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ERVK-5Q9HDB9 667 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TBCCD1Q9NVR7 557 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PDLIM1O00151 329 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TAF4O00268 1085 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MATN4O95460 622 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PLEKP08567 350 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PLK1P53350 603 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RAB10P61026 200 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 BLMHQ13867 455 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TJAP1Q5JTD0 557 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ADHFE1Q8IWW8 467 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 DEPDC4Q8N2C3 294 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF555Q8NEP9 628 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RAB2BQ8WUD1 216 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RMDN2Q96LZ7 410 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TOX2Q96NM4 488 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CSPG4P5Q96PW8 444 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ZYG11BQ9C0D3 744 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 NXF3Q9H4D5 531 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CD248Q9HCU0 757 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 USTQ9Y2C2 406 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 FNDC1Q4ZHG4 1894 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 FAM159BA6NKW6 160 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 NCK2O43639 380 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MYCNP04198 464 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RARAP10276 462 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PPP2R1BP30154 601 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 IFNGR2P38484 337 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 RPL21P46778 160 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MKRN4PQ13434 485 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PRKD1Q15139 912 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TRIP4Q15650 581 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 INAQ16352 499 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 DOK7Q18PE1 504 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MSANTD2Q6P1R3 559 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 LRRC70Q7Z2Q7 622 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CBARPQ8N350 705 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SFRP1Q8N474 314 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF655Q8N720 491 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TDRD5Q8NAT2 981 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 UBTD2Q8WUN7 234 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 NEUROD4Q9HD90 331 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SLC40A1Q9NP59 571 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PRDM5Q9NQX1 630 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PCDHGB4Q9UN71 923 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 BACE2Q9Y5Z0 518 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 H0YAE9 185 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PDE9AO76083 593 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CCNDBP1O95273 360 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CSNK1DP48730 415 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TUBA1BP68363 451 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ROR2Q01974 943 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TEKQ02763 1124 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 LAPTM5Q13571 262 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PLA2G4EQ3MJ16 856 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SLC30A10Q6XR72 485 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TUBA1AQ71U36 451 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SLAIN1Q8ND83 568 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 MOAP1Q96BY2 351 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 FIZ1Q96SL8 496 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CINPQ9BW66 212 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PLEKHA4Q9H4M7 779 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 GJB4Q9NTQ9 266 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CACNA2D2Q9NY47 1150 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 LEF1Q9UJU2 399 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ERVW-1Q9UQF0 538 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TESMINQ9Y4I5 508 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 COL4A1P02462 1669 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TRIP12Q14669 1992 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM110-MUSTN1A8MSY1 372 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 LAG3P18627 525 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ZC2HC1CQ53FD0 456 aaPredicted RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PAGE2Q7Z2X7 111 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SLC47A2Q86VL8 602 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ANKLE1Q8NAG6 615 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SNX19Q92543 992 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 AP3S1Q92572 193 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 SPATA16Q9BXB7 569 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 TDRD1Q9BXT4 1180 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 OAZ2O95190 189 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ITGA2BP08514 1039 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 JAK1P23458 1154 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 ALDH7A1P49419 539 aaKnown RBP3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CENPAP49450 140 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 PRIM2P49643 509 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 CTBSQ01459 385 aa3.8□□□□□ -1.8
SHPRH-205ENST00000433355 GAS6Q14393 721 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms