RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 hCG_1807616A0A1W2PRN6 198 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 KLK8O60259 260 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 BCAR3O75815 825 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 TMCC1O94876 653 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 CBX6O95503 412 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 TFP02787 698 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 CTPS1P17812 591 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 YWHAQP27348 245 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 PTGER1P34995 402 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLC16A2P36021 539 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 CTCFP49711 727 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 MC1RQ01726 317 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 NUCB1Q02818 461 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 CEBPZQ03701 1054 aaKnown RBP3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 NIPAL4Q0D2K0 466 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 FOXF2Q12947 444 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 BECN1Q14457 450 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 MED22Q15528 200 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 MIDNQ504T8 468 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 TTC39AQ5SRH9 613 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 KIAA1614Q5VZ46 1190 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 JADE1Q6IE81 842 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 SARM1Q6SZW1 724 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 ZNF788Q6ZQV5 615 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 FAM57BQ71RH2 274 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 CYB5R4Q7L1T6 521 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 KRT74Q7RTS7 529 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 GGNQ86UU5 652 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 TMC8Q8IU68 726 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 DHX40Q8IX18 779 aaKnown RBP3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 ADGRF2Q8IZF7 708 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 FRMD1Q8N878 549 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 GDPD5Q8WTR4 605 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 SCFD2Q8WU76 684 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 MMABQ96EY8 250 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 WDR83Q9BRX9 315 aaKnown RBP3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 H2AFJQ9BTM1 129 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 PDZD7Q9H5P4 517 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 FBRSL1Q9HCM7 1045 aaKnown RBP3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 BABAM1Q9NWV8 329 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 EHD2Q9NZN4 543 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 ADD3Q9UEY8 706 aaKnown RBP3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 ING1Q9UK53 422 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 RAI2Q9Y5P3 530 aa3.32□□□□□ -1.88
HMGB1P27-201ENST00000431429 WDR17Q8IZU2 1322 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 USP17L23D6RBM5 183 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 CYR61O00622 381 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 AP3D1O14617 1153 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 SCAMP1O15126 338 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 TP73O15350 636 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 ATG13O75143 517 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 RNF8O76064 485 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 NFATC1O95644 943 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 PRKCGP05129 697 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 CTSAP10619 480 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 RARGP13631 454 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 AKR1B1P15121 316 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 SRD5A1P18405 259 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 ITGAXP20702 1163 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 AGAP20933 346 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 KLRC2P26717 231 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 ACTN2P35609 894 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 DPP6P42658 865 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 CPA2P48052 419 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 PIP4K2AP48426 406 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 ELLP55199 621 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 ZXDAP98168 799 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 SRSF1Q07955 248 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 OLIG2Q13516 323 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 FHL2Q14192 279 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 FGFBP1Q14512 234 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 WTAPQ15007 396 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 DAZAP2Q15038 168 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 EDRF1Q3B7T1 1238 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 DPCR1Q3MIW9 517 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 CXorf66Q5JRM2 361 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 ENTPD8Q5MY95 495 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 PIK3CD-AS1Q5SR53 167 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 KLHL35Q6PF15 583 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 DLK2Q6UY11 383 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 PTF1AQ7RTS3 328 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 SERPINA11Q86U17 422 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 GPAT4Q86UL3 456 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 ARHGEF25Q86VW2 580 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 CCDC25Q86WR0 208 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 KRTAP1-3Q8IUG1 177 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 BOLLQ8N9W6 283 aaKnown RBP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 PABPC5Q96DU9 382 aaKnown RBP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 PPP1R13BQ96KQ4 1090 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 SH2D3AQ9BRG2 576 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 PNRC2Q9NPJ4 139 aaKnown RBP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 PLK2Q9NYY3 685 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 FLRT1Q9NZU1 646 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 SEL1LQ9UBV2 794 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 ZNF70Q9UC06 446 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 SNX8Q9Y5X2 465 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 COX11Q9Y6N1 276 aa3.31□□□□□ -1.88
HMGB1P27-201ENST00000431429 DCAF1Q9Y4B6 1507 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 TTBK1Q5TCY1 1321 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 C17orf102A2RUQ5 167 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms