RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 ZNF284Q2VY69 593 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 PRAMEF14Q5SWL7 426 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 KIAA1161Q6NSJ0 714 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 TMCO3Q6UWJ1 677 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 GDPD4Q6W3E5 623 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 H2AFVQ71UI9 128 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 IQCHQ86VS3 1027 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 LZTR1Q8N653 840 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 NPWQ8N729 165 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 RHBDD1Q8TEB9 315 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 TEKT4Q8WW24 435 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 RAB7BQ96AH8 199 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 FEM1CQ96JP0 617 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 CCDC42Q96M95 316 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 ELF4Q99607 663 aaPredicted RBP11.51□□□□□ -0.57
MRPL55-221ENST00000430433 PACSIN1Q9BY11 444 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 TRIM5Q9C035 493 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 PDFQ9HBH1 243 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 FZD3Q9NPG1 666 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 UVRAGQ9P2Y5 699 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 LHX3Q9UBR4 397 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 PCOLCE2Q9UKZ9 415 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 NENFQ9UMX5 172 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 FADS3Q9Y5Q0 445 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 TMEM131Q92545 1883 aa11.51□□□□□ -0.57
MRPL55-221ENST00000430433 A0A1B0GTQ1 180 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 YKT6O15498 198 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 TSPAN6O43657 245 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 AP1G1O43747 822 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 PCDHGA12O60330 932 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 HNRNPA2B1P22626 353 aaKnown RBP11.5□□□□□ -0.57
MRPL55-221ENST00000430433 AMPD1P23109 780 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 ABL2P42684 1182 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 CDH6P55285 790 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 SHC2P98077 582 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 SLC25A11Q02978 314 aaKnown RBP11.5□□□□□ -0.57
MRPL55-221ENST00000430433 SGCGQ13326 291 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 GRM3Q14832 879 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 CYTH1Q15438 398 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 TMEM259Q4ZIN3 620 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 CFAP58Q5T655 872 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 AFMIDQ63HM1 303 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 TXNRD3NBQ6F5E7 133 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 POLNQ7Z5Q5 900 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 TTC7BQ86TV6 843 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 CNGA4Q8IV77 575 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 ARHGAP12Q8IWW6 846 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 OXR1Q8N573 874 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 PAF1Q8N7H5 531 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 KLHDC7BQ96G42 594 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 CSPG4P5Q96PW8 444 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 CDC6Q99741 560 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 CINPQ9BW66 212 aaPredicted RBP11.5□□□□□ -0.57
MRPL55-221ENST00000430433 SLC17A9Q9BYT1 436 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 PCDH18Q9HCL0 1135 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 IPO11Q9UI26 975 aaKnown RBP11.5□□□□□ -0.57
MRPL55-221ENST00000430433 ZFR2Q9UPR6 939 aaKnown RBP11.5□□□□□ -0.57
MRPL55-221ENST00000430433 ITM2BQ9Y287 266 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 BTBD3Q9Y2F9 522 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 MFHAS1Q9Y4C4 1052 aa11.5□□□□□ -0.57
MRPL55-221ENST00000430433 TP53BP1Q12888 1972 aaPredicted RBP11.5□□□□□ -0.57
MRPL55-221ENST00000430433 IGLON5A6NGN9 336 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 AKR1B15C9JRZ8 316 aaPredicted RBP11.49□□□□□ -0.57
MRPL55-221ENST00000430433 INSIG1O15503 277 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 CBFA2T3O75081 653 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 PROSCO94903 275 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 ITGAVP06756 1048 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 TMEM253P0C7T8 217 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 THEGLP0DJG4 465 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 SERPINB6P35237 376 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 CLDN2P57739 230 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 IL10RBQ08334 325 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 ASTE1Q2TB18 679 aaPredicted RBP11.49□□□□□ -0.57
MRPL55-221ENST00000430433 LRRC73Q5JTD7 316 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 ZFYVE27Q5T4F4 411 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 TMCO4Q5TGY1 634 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 ARHGAP36Q6ZRI8 547 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 PTAR1Q7Z6K3 402 aaPredicted RBP11.49□□□□□ -0.57
MRPL55-221ENST00000430433 ZSCAN30Q86W11 494 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 SPATS2Q86XZ4 545 aaKnown RBP11.49□□□□□ -0.57
MRPL55-221ENST00000430433 GATAD2AQ86YP4 633 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 TMEM145Q8NBT3 493 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 CNTNAP3BQ96NU0 1288 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 CHP1Q99653 195 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 CALN1Q9BXU9 219 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 CNTNAP3Q9BZ76 1288 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 CPEB1Q9BZB8 566 aaKnown RBP11.49□□□□□ -0.57
MRPL55-221ENST00000430433 ERVMER34-1Q9H9K5 563 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 NHEJ1Q9H9Q4 299 aaPredicted RBP11.49□□□□□ -0.57
MRPL55-221ENST00000430433 SPTLC3Q9NUV7 552 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 DKK3Q9UBP4 350 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 LCMT1Q9UIC8 334 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 GGT7Q9UJ14 662 aa11.49□□□□□ -0.57
MRPL55-221ENST00000430433 APOBEC2Q9Y235 224 aaKnown RBP11.49□□□□□ -0.57
MRPL55-221ENST00000430433 TRPM6Q9BX84 2022 aa11.48□□□□□ -0.57
MRPL55-221ENST00000430433 DOCK9Q9BZ29 2069 aa11.48□□□□□ -0.57
MRPL55-221ENST00000430433 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
MRPL55-221ENST00000430433 A6NNZ2 444 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms