RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 DPP3Q9NY33 737 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 FDPSP14324 419 aaKnown RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 PLK1P53350 603 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 MTA1Q13330 715 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 ACOX1Q15067 660 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 C15orf59Q2T9L4 293 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 ALG10Q5BKT4 473 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 TRIM40Q6P9F5 258 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 HM13Q8TCT9 377 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 TTLL2Q9BWV7 592 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 CPVLQ9H3G5 476 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 LEF1Q9UJU2 399 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 TIMM8BQ9Y5J9 83 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 NOS2P35228 1153 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 AMIGO1Q86WK6 493 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 DPF2Q92785 391 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 SENP6Q9GZR1 1112 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 KLK7P49862 253 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 GALK1P51570 392 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 BCAT1P54687 386 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 ELF3P78545 371 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 CLIP3Q96DZ5 547 aa16.6■□□□□ 0.25
RIF1-204ENST00000430328 ZNF512BQ96KM6 892 aaPredicted RBP16.6■□□□□ 0.25
RIF1-204ENST00000430328 CBX4O00257 560 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 AP5Z1O43299 807 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 LHCGRP22888 699 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 CDH17Q12864 832 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 BNIP2Q12982 314 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 PRAMEF17Q5VTA0 474 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 KLHDC7AQ5VTJ3 777 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 MIB1Q86YT6 1006 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 MFHAS1Q9Y4C4 1052 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 ARL5AQ9Y689 179 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 DCLK1O15075 740 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 RPS6KA4O75676 772 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 CXCR2P25025 360 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 HOXC8P31273 242 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 RAD9BQ6WBX8 426 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 FRRS1Q6ZNA5 592 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 DNAJB14Q8TBM8 379 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 FCRL4Q96PJ5 515 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 PCDH9Q9HC56 1237 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 DHRS12A0PJE2 317 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 INSCQ1MX18 579 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 CRELD2Q6UXH1 353 aaPredicted RBP16.59■□□□□ 0.25
RIF1-204ENST00000430328 SNX20Q7Z614 316 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 DHDDSQ86SQ9 333 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 STK40Q8N2I9 435 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 OR2L8Q8NGY9 312 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 PCDH18Q9HCL0 1135 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 GMIPQ9P107 970 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 SH3BGRLO75368 114 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 BMPR2Q13873 1038 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 FUKQ8N0W3 1084 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 APBA2Q99767 749 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 NOL11Q9H8H0 719 aaKnown RBP16.59■□□□□ 0.25
RIF1-204ENST00000430328 MTMR10Q9NXD2 777 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 GIN1Q9NXP7 522 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 XKRYO14609 159 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 FOXN1O15353 648 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 UGT2B11O75310 529 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 DNASE1L1P49184 302 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 PPP3R1P63098 170 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 EMC2Q15006 297 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 MARC1Q5VT66 337 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 SLC47A1Q96FL8 570 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 KDM5DQ9BY66 1539 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 CAMTA2O94983 1202 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 RIT2Q99578 217 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 EVA1BQ9NVM1 165 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 RBM22Q9NW64 420 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■■■■■ 41.1
RIF1-204ENST00000430328 TNFSF13BQ9Y275 285 aa16.59■□□□□ 0.25
RIF1-204ENST00000430328 FTH1P02794 183 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 ANPEPP15144 967 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 POLR2LP62875 67 aaKnown RBP16.58■□□□□ 0.25
RIF1-204ENST00000430328 AMHR2Q16671 573 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 SETMARQ53H47 684 aaPredicted RBP16.58■□□□□ 0.25
RIF1-204ENST00000430328 RD3Q7Z3Z2 195 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 CHERPQ8IWX8 916 aaKnown RBP16.58■□□□□ 0.25
RIF1-204ENST00000430328 PCDH20Q8N6Y1 951 aaKnown RBP16.58■□□□□ 0.25
RIF1-204ENST00000430328 COLEC11Q9BWP8 271 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 SLC4A5Q9BY07 1137 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 CYP17A1P05093 508 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 CYP4B1P13584 511 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 KCNA5P22460 613 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 ABCA11PQ4W5N1 156 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 PDPRQ8NCN5 879 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 TMEM169Q96HH4 297 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 LRMDAQ9H2I8 198 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 RHBGQ9H310 441 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 UCKL1Q9NWZ5 548 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.25
RIF1-204ENST00000430328 H3BNX3 289 aa16.58■□□□□ 0.24
RIF1-204ENST00000430328 RIPK2O43353 540 aa16.58■□□□□ 0.24
RIF1-204ENST00000430328 FADS2O95864 444 aaKnown RBP16.58■□□□□ 0.24
RIF1-204ENST00000430328 PGAM1P18669 254 aa16.58■□□□□ 0.24
RIF1-204ENST00000430328 DCKP27707 260 aa16.58■□□□□ 0.24
RIF1-204ENST00000430328 FMR1Q06787 632 aaKnown RBP eCLIP16.58■□□□□ 0.241e-6■■■□□ 15.5
RIF1-204ENST00000430328 MCCC1Q96RQ3 725 aaPredicted RBP16.58■□□□□ 0.24
RIF1-204ENST00000430328 SQORQ9Y6N5 450 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms