RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 PLEKP08567 350 aaPredicted RBP14.73□□□□□ -0.05
SDC1-204ENST00000429035 NME1P15531 152 aaKnown RBP14.73□□□□□ -0.05
SDC1-204ENST00000429035 CHRNB2P17787 502 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 GPD1P21695 349 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 XPAP23025 273 aaPredicted RBP14.73□□□□□ -0.05
SDC1-204ENST00000429035 STAT1P42224 750 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 THOP1P52888 689 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 HDAC4P56524 1084 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 PCBP4P57723 403 aaKnown RBP14.73□□□□□ -0.05
SDC1-204ENST00000429035 CXADRP78310 365 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 KRT31Q15323 416 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 TCEA2Q15560 299 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 KIF26BQ2KJY2 2108 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 C3orf38Q5JPI3 329 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 TPRG1LQ5T0D9 272 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 ZCCHC8Q6NZY4 707 aaKnown RBP14.73□□□□□ -0.05
SDC1-204ENST00000429035 SCYL2Q6P3W7 929 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 GUSBP11Q6P575 273 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 ARCQ7LC44 396 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 STRADAQ7RTN6 431 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 EFL1Q7Z2Z2 1120 aaKnown RBP14.73□□□□□ -0.05
SDC1-204ENST00000429035 NLRP14Q86W24 1093 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 RAB7BQ96AH8 199 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 GDAP1L1Q96MZ0 367 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 IL12RB2Q99665 862 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 MAGEH1Q9H213 219 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 PRORYQ9H606 182 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 ADAM22Q9P0K1 906 aa14.73□□□□□ -0.05
SDC1-204ENST00000429035 APOBEC3BQ9UH17 382 aaKnown RBP14.73□□□□□ -0.05
SDC1-204ENST00000429035 SMG1Q96Q15 3661 aaKnown RBP14.73□□□□□ -0.05
SDC1-204ENST00000429035 LY6G6EA0A0G2JKS1 128 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 SPTY2D1-AS1A0A0U1RR47 76 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 CREB3O43889 395 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 KRT3P12035 628 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 EPHB2P29323 1055 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 IGFALSP35858 605 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 PTPN9P43378 593 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 RHOAP61586 193 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 NRG1Q02297 640 aaPredicted RBP14.72□□□□□ -0.05
SDC1-204ENST00000429035 RAD51Q06609 339 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 C1orf61Q13536 156 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 EFHC2Q5JST6 749 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 DNAJC24Q6P3W2 148 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 FOXR1Q6PIV2 292 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 GDPD4Q6W3E5 623 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 ZSCAN30Q86W11 494 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 SPACA3Q8IXA5 215 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 PYROXD2Q8N2H3 581 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 DENND6BQ8NEG7 585 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 SLC39A7Q92504 469 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 ISG20Q96AZ6 181 aaKnown RBP14.72□□□□□ -0.05
SDC1-204ENST00000429035 ARHGEF26Q96DR7 871 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 EXOC2Q96KP1 924 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 WRAP53Q9BUR4 548 aaKnown RBP14.72□□□□□ -0.05
SDC1-204ENST00000429035 OSBPL1AQ9BXW6 950 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 USP29Q9HBJ7 922 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 GPR27Q9NS67 375 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 WDR70Q9NW82 654 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 KLF15Q9UIH9 416 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 NEU3Q9UQ49 428 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 U3KQA8 63 aa14.72□□□□□ -0.05
SDC1-204ENST00000429035 COL27A1Q8IZC6 1860 aaPredicted RBP14.72□□□□□ -0.05
SDC1-204ENST00000429035 ANKRD62A6NC57 917 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 MUSKO15146 869 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 SPINT1O43278 529 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 CCP110O43303 1012 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 MMP20O60882 483 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 CALB1P05937 261 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 GP1BAP07359 652 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 JAM2P57087 298 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 EIF2B5Q13144 721 aaKnown RBP14.71□□□□□ -0.05
SDC1-204ENST00000429035 NR0B2Q15466 257 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 MYLK3Q32MK0 819 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 PRRT3Q5FWE3 981 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 BROXQ5VW32 411 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 CDCP2Q5VXM1 449 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 SLFN11Q7Z7L1 901 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 TTC7BQ86TV6 843 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 PHACTR4Q8IZ21 702 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 CACTIN-AS1Q8N1I8 211 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 FAM181AQ8N9Y4 354 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 ZNF248Q8NDW4 579 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 ANKRD20A12PQ8NF67 263 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 NEK11Q8NG66 645 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 ENOX1Q8TC92 643 aaKnown RBP14.71□□□□□ -0.05
SDC1-204ENST00000429035 MCEEQ96PE7 176 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 PCDHB18PQ96TA0 734 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 KLF6Q99612 283 aaPredicted RBP14.71□□□□□ -0.05
SDC1-204ENST00000429035 EPAS1Q99814 870 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 C1QTNF7Q9BXJ2 289 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 C1QTNF2Q9BXJ5 285 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 TCEAL2Q9H3H9 227 aaPredicted RBP14.71□□□□□ -0.05
SDC1-204ENST00000429035 SPASTQ9UBP0 616 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 DOLKQ9UPQ8 538 aa14.71□□□□□ -0.05
SDC1-204ENST00000429035 LRP4O75096 1905 aa14.7□□□□□ -0.06
SDC1-204ENST00000429035 BPTFQ12830 3046 aa14.7□□□□□ -0.06
SDC1-204ENST00000429035 ZSCAN5CA6NGD5 496 aaPredicted RBP14.7□□□□□ -0.06
SDC1-204ENST00000429035 KDELR3O43731 214 aa14.7□□□□□ -0.06
SDC1-204ENST00000429035 TM7SF2O76062 418 aa14.7□□□□□ -0.06
SDC1-204ENST00000429035 PIGNO95427 931 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms