RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 THEGLP0DJG4 465 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 SPINK2P20155 84 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 KRT81Q14533 505 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 GRM3Q14832 879 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 SEL1L3Q68CR1 1132 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 ZSCAN30Q86W11 494 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 GATAD2AQ86YP4 633 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 EXOC2Q96KP1 924 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 CINPQ9BW66 212 aaPredicted RBP20.95■□□□□ 0.94
HSPG2-205ENST00000427897 SCNM1Q9BWG6 230 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 CALN1Q9BXU9 219 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 SLC17A9Q9BYT1 436 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 ERVMER34-1Q9H9K5 563 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 FZD3Q9NPG1 666 aa20.95■□□□□ 0.94
HSPG2-205ENST00000427897 ZFR2Q9UPR6 939 aaKnown RBP20.95■□□□□ 0.94
HSPG2-205ENST00000427897 CACNA1EQ15878 2313 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 HYAL3O43820 417 aaPredicted RBP20.94■□□□□ 0.94
HSPG2-205ENST00000427897 PRAMEF11O60813 436 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 PAK4O96013 591 aaPredicted RBP20.94■□□□□ 0.94
HSPG2-205ENST00000427897 H2AFZP0C0S5 128 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 FTH1P19P0C7X4 201 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 CYTH1Q15438 398 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 CCDC157Q569K6 752 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 ZFYVE27Q5T4F4 411 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 TMCO3Q6UWJ1 677 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 DBX2Q6ZNG2 339 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 H2AFVQ71UI9 128 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 PNPLA1Q8N8W4 532 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 FAM174AQ8TBP5 190 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 ZNF564Q8TBZ8 553 aaPredicted RBP20.94■□□□□ 0.94
HSPG2-205ENST00000427897 FTSJ1Q9UET6 329 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 IPO11Q9UI26 975 aaKnown RBP20.94■□□□□ 0.94
HSPG2-205ENST00000427897 CA5BQ9Y2D0 317 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 BTBD3Q9Y2F9 522 aa20.94■□□□□ 0.94
HSPG2-205ENST00000427897 TP53BP1Q12888 1972 aaPredicted RBP20.94■□□□□ 0.94
HSPG2-205ENST00000427897 C10orf142B7Z368 130 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 CBFA2T3O75081 653 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 RARAP10276 462 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 HNRNPH3P31942 346 aaKnown RBP20.93■□□□□ 0.94
HSPG2-205ENST00000427897 SLC18A3Q16572 532 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 GLRX5Q86SX6 157 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 CHCHD4Q8N4Q1 142 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 CXorf40AQ8TE69 158 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 NSMCE1Q8WV22 266 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 CCDC42Q96M95 316 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 CPEB1Q9BZB8 566 aaKnown RBP20.93■□□□□ 0.94
HSPG2-205ENST00000427897 MFHAS1Q9Y4C4 1052 aa20.93■□□□□ 0.94
HSPG2-205ENST00000427897 IGLON5A6NGN9 336 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 A6NNZ2 444 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 FPGTO14772 594 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 TNFSF14O43557 240 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 TOP3BO95985 862 aaKnown RBP20.92■□□□□ 0.94
HSPG2-205ENST00000427897 AMPD1P23109 780 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 IL1R2P27930 398 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 GJC1P36383 396 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 CLDN2P57739 230 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 IL10RBQ08334 325 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 RFTN1Q14699 578 aaPredicted RBP20.92■□□□□ 0.94
HSPG2-205ENST00000427897 DPYSL2Q16555 572 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 HS1BP3Q53T59 392 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 CYP4V2Q6ZWL3 525 aaPredicted RBP20.92■□□□□ 0.94
HSPG2-205ENST00000427897 VSTM4Q8IW00 320 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 NIPA2Q8N8Q9 360 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 TEKT4Q8WW24 435 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 C1QTNF7Q9BXJ2 289 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 LHX3Q9UBR4 397 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 LCMT1Q9UIC8 334 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 HS3ST3A1Q9Y663 406 aa20.92■□□□□ 0.94
HSPG2-205ENST00000427897 LDOC1O95751 146 aaPredicted RBP20.91■□□□□ 0.94
HSPG2-205ENST00000427897 SERPINB6P35237 376 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 ABL2P42684 1182 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 RENBPP51606 427 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 ADKP55263 362 aaKnown RBP20.91■□□□□ 0.94
HSPG2-205ENST00000427897 CDH6P55285 790 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 BNIP3Q12983 259 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 TMEM259Q4ZIN3 620 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 POLNQ7Z5Q5 900 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 PTAR1Q7Z6K3 402 aaPredicted RBP20.91■□□□□ 0.94
HSPG2-205ENST00000427897 SPATS2Q86XZ4 545 aaKnown RBP20.91■□□□□ 0.94
HSPG2-205ENST00000427897 DCP2Q8IU60 420 aaKnown RBP20.91■□□□□ 0.94
HSPG2-205ENST00000427897 BBS5Q8N3I7 341 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 EID2Q8N6I1 236 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 DNAJC7Q99615 494 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 TRIM5Q9C035 493 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 SUV39H2Q9H5I1 410 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 ATP13A3Q9H7F0 1226 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 PDFQ9HBH1 243 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 ABHD10Q9NUJ1 306 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 UVRAGQ9P2Y5 699 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 ITM2BQ9Y287 266 aa20.91■□□□□ 0.94
HSPG2-205ENST00000427897 SSU72P8A0A1W2PR75 194 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 TMEM110-MUSTN1A8MSY1 372 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 INSIG1O15503 277 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 PIGNO95427 931 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 TCF4P15884 667 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 SERPINA4P29622 427 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 RXRGP48443 463 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 BCL2L1Q07817 233 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 ELP6Q0PNE2 266 aa20.9■□□□□ 0.94
HSPG2-205ENST00000427897 DPYSQ14117 519 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms