RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MAJINQ3KP22 176 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 OLFML2BQ68BL8 750 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ATG14Q6ZNE5 492 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 GPSM1Q86YR5 675 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 GAD1Q99259 594 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ADAM33Q9BZ11 813 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.79□□□□□ -1.48
HERC4-206ENST00000427635 CLEC4MQ9H2X3 399 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 ZMYM5Q9UJ78 669 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 ANKRD6Q9Y2G4 727 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 AP3M1Q9Y2T2 418 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CAMSAP1Q5T5Y3 1602 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ZSCAN5CA6NGD5 496 aaPredicted RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 OR6C75A6NL08 312 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 TRIM24O15164 1050 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 FAM20BO75063 409 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 KRT34O76011 436 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 TOP3BO95985 862 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 LGALS2P05162 132 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 EPHX1P07099 455 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 TSPAN19P0C672 248 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 CCKBRP32239 447 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 NME5P56597 212 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ILF3Q12906 894 aaKnown RBP eCLIP5.78□□□□□ -1.481e-6■■■■□ 22.3
HERC4-206ENST00000427635 SMCO1Q147U7 214 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 LRRC14Q15048 493 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 PGM5Q15124 567 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 PRMT9Q6P2P2 845 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 RIOX2Q8IUF8 465 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 MB21D2Q8IYB1 491 aaPredicted RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 COLGALT1Q8NBJ5 622 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ATP6V1C2Q8NEY4 427 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 CELF6Q96J87 481 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 NAT9Q9BTE0 207 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 DDX47Q9H0S4 455 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 IMP3Q9NV31 184 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 DNAJC16Q9Y2G8 782 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 TECPR2O15040 1411 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 LRRC10BA6NIK2 292 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 XKRYO14609 159 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 LAMTOR5O43504 91 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 NTSR2O95665 410 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 KRT75O95678 551 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 LTFP02788 710 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SPATA31D3P0C874 917 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 CLCN2P51788 898 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 PER3P56645 1201 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ITGA7Q13683 1181 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SF1Q15637 639 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 ATP13A5Q4VNC0 1218 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SPATA31D4Q6ZUB0 917 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 KCTD8Q6ZWB6 473 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 CHST9Q7L1S5 443 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 FAM131BQ86XD5 332 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 CLEC10AQ8IUN9 316 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SETD6Q8TBK2 473 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 EEF1AKMT1Q8WVE0 214 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 PRCCQ92733 491 aaPredicted RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 C18orf25Q96B23 403 aaPredicted RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 GPER1Q99527 375 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 TSC22D3Q99576 134 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 CELF4Q9BZC1 486 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 DPEP2Q9H4A9 486 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 OSBPL3Q9H4L5 887 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 TMEM216Q9P0N5 145 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 EIF2B4Q9UI10 523 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 CHKBQ9Y259 395 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ANGPT4Q9Y264 503 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 GIT1Q9Y2X7 761 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 LYVE1Q9Y5Y7 322 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 CD163L1Q9NR16 1453 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 TULP4Q9NRJ4 1543 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 CCDC154A6NI56 674 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 O00370 1275 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SEPT4O43236 478 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SEC31AO94979 1220 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 TNFP01375 233 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 MAGEA4P43358 317 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 STT3AP46977 705 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SCNN1GP51170 649 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ITGA1P56199 1179 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ZNF155Q12901 538 aaPredicted RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 ARSHQ5FYA8 562 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SPANXN3Q5MJ09 141 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 INTS11Q5TA45 600 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 GRTP1Q5TC63 336 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 RAP1GAP2Q684P5 730 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ACTRT2Q8TDY3 377 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 KCNJ9Q92806 393 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ITCHQ96J02 903 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 FEM1CQ96JP0 617 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SENP8Q96LD8 212 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 SH3GL2Q99962 352 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 ASB8Q9H765 288 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 FBXO28Q9NVF7 368 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 MARCOQ9UEW3 520 aaPredicted RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 MGAT4AQ9UM21 535 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 PCDHGC5Q9Y5F6 944 aa5.78□□□□□ -1.48
HERC4-206ENST00000427635 TNPO3Q9Y5L0 923 aaKnown RBP5.78□□□□□ -1.48
HERC4-206ENST00000427635 A0A1W2PQC6 194 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms