RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 SLC39A8Q9C0K1 460 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 THAP2Q9H0W7 228 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 LRRC19Q9H756 370 aa18.69■□□□□ 0.58
GPC1-205ENST00000427506 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.69■□□□□ 0.58
GPC1-205ENST00000427506 J3KR12 359 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 DFFAO00273 331 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 LDOC1O95751 146 aaPredicted RBP18.68■□□□□ 0.58
GPC1-205ENST00000427506 GYPCP04921 128 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 CASP14P31944 242 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 PCK1P35558 622 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 PAPOLAP51003 745 aaKnown RBP18.68■□□□□ 0.58
GPC1-205ENST00000427506 ZNF135P52742 658 aaPredicted RBP18.68■□□□□ 0.58
GPC1-205ENST00000427506 CYTH1Q15438 398 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 ZSCAN30Q86W11 494 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 OR13H1Q8NG92 308 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 GATA6Q92908 595 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 CNDP2Q96KP4 475 aaKnown RBP18.68■□□□□ 0.58
GPC1-205ENST00000427506 XPO4Q9C0E2 1151 aaKnown RBP18.68■□□□□ 0.58
GPC1-205ENST00000427506 ZWILCHQ9H900 591 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 TOR4AQ9NXH8 423 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 LHX3Q9UBR4 397 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 ITM2BQ9Y287 266 aa18.68■□□□□ 0.58
GPC1-205ENST00000427506 ACACBO00763 2458 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 A0A087X0T9 212 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 IGLON5A6NGN9 336 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 A6NNZ2 444 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 PRAMEF11O60813 436 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 SDC3O75056 442 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 FAM228BP0C875 321 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 XPAP23025 273 aaPredicted RBP18.67■□□□□ 0.58
GPC1-205ENST00000427506 ARL4AP40617 200 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 PIGHQ14442 188 aaPredicted RBP18.67■□□□□ 0.58
GPC1-205ENST00000427506 SMTNL2Q2TAL5 461 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 LRRC73Q5JTD7 316 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 CCDC122Q5T0U0 273 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 GCNT7Q6ZNI0 430 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 CYP4V2Q6ZWL3 525 aaPredicted RBP18.67■□□□□ 0.58
GPC1-205ENST00000427506 PTAR1Q7Z6K3 402 aaPredicted RBP18.67■□□□□ 0.58
GPC1-205ENST00000427506 FAM174AQ8TBP5 190 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 HSPH1Q92598 858 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 NUP85Q9BW27 656 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 SP110Q9HB58 689 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 CWC15Q9P013 229 aaKnown RBP18.67■□□□□ 0.58
GPC1-205ENST00000427506 GGT7Q9UJ14 662 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 ANAPC7Q9UJX3 599 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 MFHAS1Q9Y4C4 1052 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 HS3ST3A1Q9Y663 406 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 CHD5Q8TDI0 1954 aa18.67■□□□□ 0.58
GPC1-205ENST00000427506 TP53BP1Q12888 1972 aaPredicted RBP18.66■□□□□ 0.58
GPC1-205ENST00000427506 FAM221BA6H8Z2 402 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 H3BRJ5 948 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 ENC1O14682 589 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 INSIG1O15503 277 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 CBFA2T2O43439 604 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 PALMO75781 387 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 SSR1P43307 286 aaKnown RBP18.66■□□□□ 0.58
GPC1-205ENST00000427506 HCAR3P49019 387 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 FGL2Q14314 439 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 BOLA3Q53S33 107 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 CFAP58Q5T655 872 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 ALKBH5Q6P6C2 394 aaKnown RBP18.66■□□□□ 0.58
GPC1-205ENST00000427506 Q6ZSR6 202 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 TMEM121BQ9BXQ6 578 aaPredicted RBP18.66■□□□□ 0.58
GPC1-205ENST00000427506 CPEB1Q9BZB8 566 aaKnown RBP18.66■□□□□ 0.58
GPC1-205ENST00000427506 PDFQ9HBH1 243 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 KLHL11Q9NVR0 708 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 IP6K2Q9UHH9 426 aa18.66■□□□□ 0.58
GPC1-205ENST00000427506 TPRP12270 2363 aaKnown RBP18.66■□□□□ 0.58
GPC1-205ENST00000427506 TMEM8BA6NDV4 472 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 FPGTO14772 594 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 PIGNO95427 931 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 IL1R2P27930 398 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 GRM3Q14832 879 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 ABI3BPQ7Z7G0 1075 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 DCP2Q8IU60 420 aaKnown RBP18.65■□□□□ 0.58
GPC1-205ENST00000427506 LZTR1Q8N653 840 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 CXorf40AQ8TE69 158 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 VOPP1Q96AW1 172 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 BTBD6Q96KE9 485 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 BMFQ96LC9 184 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 CINPQ9BW66 212 aaPredicted RBP18.65■□□□□ 0.58
GPC1-205ENST00000427506 C1QTNF2Q9BXJ5 285 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 TSPY26PQ9H489 355 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.65■□□□□ 0.58
GPC1-205ENST00000427506 IPO11Q9UI26 975 aaKnown RBP18.65■□□□□ 0.58
GPC1-205ENST00000427506 KNL1Q8NG31 2342 aa18.65■□□□□ 0.58
GPC1-205ENST00000427506 CHD8Q9HCK8 2581 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 POM121BA6NF01 834 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 RAD51BO15315 384 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 MMP20O60882 483 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 CYP1A2P05177 515 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 RARAP10276 462 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 TCF4P15884 667 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 TIMP2P16035 220 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 IL10RBQ08334 325 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 DNAJC3Q13217 504 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 DPYSQ14117 519 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 DPYSL2Q16555 572 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 HS1BP3Q53T59 392 aa18.64■□□□□ 0.57
GPC1-205ENST00000427506 AFMIDQ63HM1 303 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms