RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 CALN1Q9BXU9 219 aa10.33□□□□□ -0.76
COMMD1-202ENST00000427417 DHX35Q9H5Z1 703 aaKnown RBP10.33□□□□□ -0.76
COMMD1-202ENST00000427417 NOL6Q9H6R4 1146 aaKnown RBP10.33□□□□□ -0.76
COMMD1-202ENST00000427417 CAAP1Q9H8G2 361 aa10.33□□□□□ -0.76
COMMD1-202ENST00000427417 FZD3Q9NPG1 666 aa10.33□□□□□ -0.76
COMMD1-202ENST00000427417 KLHL11Q9NVR0 708 aa10.33□□□□□ -0.76
COMMD1-202ENST00000427417 UBA2Q9UBT2 640 aaPredicted RBP10.33□□□□□ -0.76
COMMD1-202ENST00000427417 ZFR2Q9UPR6 939 aaKnown RBP10.33□□□□□ -0.76
COMMD1-202ENST00000427417 MFHAS1Q9Y4C4 1052 aa10.33□□□□□ -0.76
COMMD1-202ENST00000427417 ARHGAP42A6NI28 874 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 SRRM3A6NNA2 597 aaPredicted RBP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 DDX3XO00571 662 aaKnown RBP eCLIP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 FPGTO14772 594 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 RFPL3O75679 317 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 PAK4O96013 591 aaPredicted RBP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 TPM3P06753 285 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 SKILP12757 684 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 PCK1P35558 622 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 RABIFP47224 123 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 SUOXP51687 545 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 CLDN6P56747 220 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 BNIP3Q12983 259 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 ILKQ13418 452 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 ATXN7L2Q5T6C5 722 aaPredicted RBP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 KYAT3Q6YP21 454 aaKnown RBP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 LEKR1Q6ZMV7 388 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 GCNT7Q6ZNI0 430 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 ABI3BPQ7Z7G0 1075 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 TTC7BQ86TV6 843 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 LUZP1Q86V48 1076 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 DNAAF5Q86Y56 855 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 DENND6BQ8NEG7 585 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 HCAR2Q8TDS4 363 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 ASB12Q8WXK4 309 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 KLHL32Q96NJ5 620 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 LENG8Q96PV6 779 aaPredicted RBP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 C1QTNF7Q9BXJ2 289 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 CPEB1Q9BZB8 566 aaKnown RBP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 ISCUQ9H1K1 167 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 LRRC19Q9H756 370 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 ZWILCHQ9H900 591 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 MYO1AQ9UBC5 1043 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 PCSK1NQ9UHG2 260 aa10.32□□□□□ -0.76
COMMD1-202ENST00000427417 COL5A1P20908 1838 aaPredicted RBP10.32□□□□□ -0.76
COMMD1-202ENST00000427417 FAM149AA5PLN7 773 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 NEMP2A6NFY4 417 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 TAF4O00268 1085 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 SERPING1P05155 500 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 ALPPL2P10696 532 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 CKMT2P17540 419 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 XPAP23025 273 aaPredicted RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 MIPP30301 263 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 GKP32189 559 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 HNF1BP35680 557 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 HCAR3P49019 387 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 CLDN2P57739 230 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 ZBED6P86452 979 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 ELP6Q0PNE2 266 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 SMAD1Q15797 465 aaKnown RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 PPP6R3Q5H9R7 873 aaPredicted RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 CFAP58Q5T655 872 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 E4F1Q66K89 784 aaPredicted RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 Q6ZSR6 202 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 RFX8Q6ZV50 586 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 PTAR1Q7Z6K3 402 aaPredicted RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 TMPRSS12Q86WS5 348 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 LZTR1Q8N653 840 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 OR13H1Q8NG92 308 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 CXorf40AQ8TE69 158 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 SNRNP25Q9BV90 132 aaKnown RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 C1QTNF2Q9BXJ5 285 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 CCDC86Q9H6F5 360 aaKnown RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 GPATCH2LQ9NWQ4 482 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 DKK3Q9UBP4 350 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 IPO11Q9UI26 975 aaKnown RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 LUC7L2Q9Y383 392 aaKnown RBP10.31□□□□□ -0.76
COMMD1-202ENST00000427417 CHD5Q8TDI0 1954 aa10.31□□□□□ -0.76
COMMD1-202ENST00000427417 IGLON5A6NGN9 336 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 H3BM21 787 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 TOR1BO14657 336 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 AREL1O15033 823 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 PRAMEF11O60813 436 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 SDC3O75056 442 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 LRCH4O75427 683 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 PALMO75781 387 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 TM7SF2O76062 418 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 ERCC2P18074 760 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 DGKAP23743 735 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 PBX1P40424 430 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 ARL4AP40617 200 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 ABL2P42684 1182 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 ACADVLP49748 655 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 PAPOLAP51003 745 aaKnown RBP10.3□□□□□ -0.76
COMMD1-202ENST00000427417 HNRNPKP61978 463 aaKnown RBP eCLIP10.3□□□□□ -0.76
COMMD1-202ENST00000427417 ZNF211Q13398 564 aaPredicted RBP10.3□□□□□ -0.76
COMMD1-202ENST00000427417 PTK2BQ14289 1009 aa10.3□□□□□ -0.76
COMMD1-202ENST00000427417 PIGHQ14442 188 aaPredicted RBP10.3□□□□□ -0.76
COMMD1-202ENST00000427417 RFTN1Q14699 578 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms