RNA–Protein interactions for RNA: ENST00000426726.7

RUNDC3A-202, Transcript of RUN domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RUNDC3A, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-202ENST00000426726 IFT43Q96FT9 208 aa23.17■■□□□ 1.3
RUNDC3A-202ENST00000426726 RANBP9Q96S59 729 aa23.17■■□□□ 1.3
RUNDC3A-202ENST00000426726 SLC28A3Q9HAS3 691 aa23.17■■□□□ 1.3
RUNDC3A-202ENST00000426726 KIAA1522Q9P206 1035 aaPredicted RBP23.17■■□□□ 1.3
RUNDC3A-202ENST00000426726 TBC1D14Q9P2M4 693 aa23.17■■□□□ 1.3
RUNDC3A-202ENST00000426726 VPS51Q9UID3 782 aa23.17■■□□□ 1.3
RUNDC3A-202ENST00000426726 CHD7Q9P2D1 2997 aa23.17■■□□□ 1.3
RUNDC3A-202ENST00000426726 SNAP91O60641 907 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 FAM155BO75949 473 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 KRT4P19013 534 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 CR2P20023 1033 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 KDELC2Q7Z4H8 507 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 C4orf33Q8N1A6 199 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 SLC25A41Q8N5S1 370 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 ATXN2LQ8WWM7 1075 aaKnown RBP23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 ACDQ96AP0 544 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 TTC24A2A3L6 582 aaPredicted RBP23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 HEATR9A2RTY3 570 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 UGT1A9O60656 530 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 TMCC1O94876 653 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 FGF1P05230 155 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 NMBRP28336 390 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 PPARDQ03181 441 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 CDK18Q07002 472 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 SLC12A1Q13621 1099 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 PDPK2PQ6A1A2 396 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 RETSATQ6NUM9 610 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 KCNMB4Q86W47 210 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 RIN3Q8TB24 985 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 OTUB2Q96DC9 234 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 SGSM3Q96HU1 749 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 NUDCD1Q96RS6 583 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 UGT1A7Q9HAW7 530 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 UGT1A10Q9HAW8 530 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 UGT1A8Q9HAW9 530 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 DZANK1Q9NVP4 752 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 TXNDC16Q9P2K2 825 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 CHD9Q3L8U1 2897 aa23.16■■□□□ 1.3
RUNDC3A-202ENST00000426726 TRIM49D1C9J1S8 452 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 INSIG1O15503 277 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 CD160O95971 181 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 ATXN1LP0C7T5 689 aaKnown RBP23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 ERVK-10P10266 1014 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 SIRPB2Q5JXA9 342 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 PACS1Q6VY07 963 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 ANKRD42Q8N9B4 389 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 CPNE1Q99829 537 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 SCUBE2Q9NQ36 999 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 PLK2Q9NYY3 685 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 CXorf51AA0A1B0GTR3 108 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 PAMP19021 973 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 LMAN2Q12907 356 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 KCNC3Q14003 757 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 METTL3Q86U44 580 aaKnown RBP23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 ZNF557Q8N988 423 aaPredicted RBP23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 ING5Q8WYH8 240 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 PPP2R3CQ969Q6 453 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 NOD2Q9HC29 1040 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 C20orf96Q9NUD7 363 aaPredicted RBP23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 NSMCE4AQ9NXX6 385 aa23.15■■□□□ 1.3
RUNDC3A-202ENST00000426726 TYROBPO43914 113 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 GJB3O75712 270 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 PENKP01210 267 aaPredicted RBP23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 WEE1P30291 646 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 GP5P40197 560 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 RGRP47804 291 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 DNAJC3Q13217 504 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 MPP2Q14168 576 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 RALGPS1Q5JS13 557 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 LINGO4Q6UY18 593 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 KIAA1958Q8N8K9 716 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 ZSWIM3Q96MP5 696 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 EPN3Q9H201 632 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 CCDC134Q9H6E4 229 aa23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 ARIH1Q9Y4X5 557 aaPredicted RBP23.14■■□□□ 1.29
RUNDC3A-202ENST00000426726 SCNN1BP51168 640 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 PLK1P53350 603 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 NSUN2Q08J23 767 aaKnown RBP eCLIP23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 SEPT6Q14141 434 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 ARID3BQ8IVW6 561 aaPredicted RBP23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 ZNF778Q96MU6 729 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 IL1RAPL1Q9NZN1 696 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 SLC9A3R1O14745 358 aaPredicted RBP23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 SPAG7O75391 227 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 NDST3O95803 873 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 CA4P22748 312 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 MSLNQ13421 630 aaPredicted RBP23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 LAMB3Q13751 1172 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 PLEKHG6Q3KR16 790 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 KIAA0930Q6ICG6 404 aaPredicted RBP23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 TMC5Q6UXY8 1006 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 NLRP9Q7RTR0 991 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 APCDD1Q8J025 514 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 C12orf76Q8N812 135 aaPredicted RBP23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 ITFG1Q8TB96 612 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 MGARPQ8TDB4 240 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 DYDC1Q8WWB3 177 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 EXOC2Q96KP1 924 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 TREX1Q9NSU2 369 aa23.13■■□□□ 1.29
RUNDC3A-202ENST00000426726 LHX3Q9UBR4 397 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms