RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PRKD2Q9BZL6 878 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 HCFC1R1Q9NWW0 138 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 RWDD3Q9Y3V2 267 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 H0Y626 953 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 ARHGEF15O94989 841 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 VAPBO95292 243 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 CSE1LP55060 971 aaKnown RBP26.8■■□□□ 1.88
LDB1-202ENST00000425280 CNGA3Q16281 694 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 HTR3DQ70Z44 454 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 PITPNM3Q9BZ71 974 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 HAUS2Q9NVX0 235 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 HEATR9A2RTY3 570 aa26.79■■□□□ 1.88
LDB1-202ENST00000425280 CCR2P41597 374 aa26.79■■□□□ 1.88
LDB1-202ENST00000425280 PDE1CQ14123 709 aaPredicted RBP26.79■■□□□ 1.88
LDB1-202ENST00000425280 DCLK2Q8N568 766 aa26.79■■□□□ 1.88
LDB1-202ENST00000425280 ATXN7L3BQ96GX2 97 aa26.79■■□□□ 1.88
LDB1-202ENST00000425280 FEM1CQ96JP0 617 aa26.79■■□□□ 1.88
LDB1-202ENST00000425280 SLC46A2Q9BY10 475 aa26.79■■□□□ 1.88
LDB1-202ENST00000425280 SLCO1B3Q9NPD5 702 aa26.79■■□□□ 1.88
LDB1-202ENST00000425280 NSMCE4AQ9NXX6 385 aa26.79■■□□□ 1.88
LDB1-202ENST00000425280 TYW5A2RUC4 315 aaKnown RBP26.78■■□□□ 1.88
LDB1-202ENST00000425280 LUC7L3O95232 432 aaKnown RBP26.78■■□□□ 1.88
LDB1-202ENST00000425280 TOP3BO95985 862 aaKnown RBP26.78■■□□□ 1.88
LDB1-202ENST00000425280 RGRP47804 291 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 IFT88Q13099 833 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 CYTH1Q15438 398 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 FSTL4Q6MZW2 842 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 CNTN4Q8IWV2 1026 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 MICAL1Q8TDZ2 1067 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 ISL2Q96A47 359 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 SH3BP1Q9Y3L3 701 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 SERPINF2P08697 491 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 MZF1P28698 734 aaPredicted RBP26.78■■□□□ 1.88
LDB1-202ENST00000425280 ABCG1P45844 678 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 SERPINB4P48594 390 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 ARF5P84085 180 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 UBE3AQ05086 875 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 CDK18Q07002 472 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 KIAA0930Q6ICG6 404 aaPredicted RBP26.78■■□□□ 1.88
LDB1-202ENST00000425280 IFT43Q96FT9 208 aa26.78■■□□□ 1.88
LDB1-202ENST00000425280 MTIF3Q9H2K0 278 aaKnown RBP26.78■■□□□ 1.88
LDB1-202ENST00000425280 MTO1Q9Y2Z2 717 aaKnown RBP26.78■■□□□ 1.88
LDB1-202ENST00000425280 DOCK6Q96HP0 2047 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 RFPL2O75678 378 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 MYOGP15173 224 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 PAMP19021 973 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 IRS1P35568 1242 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 MAGEA12P43365 314 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 CAMK1Q14012 370 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 ITIH4Q14624 930 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 SPATA21Q7Z572 469 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 BBS7Q8IWZ6 715 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 WFDC5Q8TCV5 224 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 NSMCE3Q96MG7 304 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 NOD2Q9HC29 1040 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 PHTF1Q9UMS5 762 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 ZNF510Q9Y2H8 683 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 USP15Q9Y4E8 981 aaPredicted RBP26.77■■□□□ 1.88
LDB1-202ENST00000425280 C5orf67F2Z3F1 127 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 SNAP91O60641 907 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 ZMPSTE24O75844 475 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 EPOP01588 193 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 PFKLP17858 780 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 CR2P20023 1033 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 TYK2P29597 1187 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 SLC14A2Q15849 920 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 TSTD2Q5T7W7 516 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 ANKS4BQ8N8V4 417 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 ARMC2Q8NEN0 867 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 PTPRN2Q92932 1015 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 FEM1AQ9BSK4 669 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 MANSC1Q9H8J5 431 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 MAN1C1Q9NR34 630 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 SNX15Q9NRS6 342 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 OR51B4Q9Y5P0 310 aa26.77■■□□□ 1.88
LDB1-202ENST00000425280 GRM6O15303 877 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 TIMM44O43615 452 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 EDF1O60869 148 aaKnown RBP26.76■■□□□ 1.87
LDB1-202ENST00000425280 CD160O95971 181 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 HLA-DPA1P20036 260 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 PPM1JQ5JR12 505 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 SHKBP1Q8TBC3 707 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 BHMTQ93088 406 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 GRAMD1AQ96CP6 724 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 VPS39Q96JC1 886 aa26.76■■□□□ 1.87
LDB1-202ENST00000425280 SMG9Q9H0W8 520 aaKnown RBP26.76■■□□□ 1.87
LDB1-202ENST00000425280 LEFTY2O00292 366 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 SIN3BO75182 1162 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 SERPINB8P50452 374 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 EPHA5P54756 1037 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 LINGO4Q6UY18 593 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 CMC1Q7Z7K0 106 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 CPXM2Q8N436 756 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 TDRD5Q8NAT2 981 aaKnown RBP26.75■■□□□ 1.87
LDB1-202ENST00000425280 TCEAL4Q96EI5 215 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 EXOC2Q96KP1 924 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 TRIB3Q96RU7 358 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 STARD13Q9Y3M8 1113 aa26.75■■□□□ 1.87
LDB1-202ENST00000425280 ATXN2Q99700 1313 aaKnown RBP26.75■■□□□ 1.87
LDB1-202ENST00000425280 MROH6A6NGR9 719 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms