RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 VARS2Q5ST30 1063 aaKnown RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 NAPEPLDQ6IQ20 393 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 BHLHA9Q7RTU4 235 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 MYLK4Q86YV6 388 aaPredicted RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 SCN4BQ8IWT1 228 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 TMEM199Q8N511 208 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 ATPAF2Q8N5M1 289 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 CNTD1Q8N815 330 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 MAPK15Q8TD08 544 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 CMTM5Q96DZ9 223 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 ACBD6Q9BR61 282 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 GATA5Q9BWX5 397 aaPredicted RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 ACE2Q9BYF1 805 aaPredicted RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 YIPF3Q9GZM5 350 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 BRD8Q9H0E9 1235 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 C1orf21Q9H246 121 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 FAM96AQ9H5X1 160 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 WDR55Q9H6Y2 383 aaPredicted RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 REV3LO60673 3130 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 HOXA2O43364 376 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 ZBTB14O43829 449 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 PARNO95453 639 aaKnown RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 SERPINB5P36952 375 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 ANO4Q32M45 955 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 CTXN3Q4LDR2 81 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 SDHAF4Q5VUM1 108 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 ARMC3Q5W041 872 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 FRMD7Q6ZUT3 714 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 SLC41A1Q8IVJ1 513 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 C7orf61Q8IZ16 206 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 GPR152Q8TDT2 470 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 BCL7CQ8WUZ0 217 aaPredicted RBP10.81□□□□□ -0.68
CUX1-205ENST00000425244 KCTD4Q8WVF5 259 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 OR52B2Q96RD2 323 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 ATXN3LQ9H3M9 355 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 PACSIN3Q9UKS6 424 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 DSEQ9UL01 958 aa10.81□□□□□ -0.68
CUX1-205ENST00000425244 MAGEB16A2A368 324 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 A6NHS1 94 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 INPPL1O15357 1258 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 PMPCBO75439 489 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 SOAT2O75908 522 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 VAPBO95292 243 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 LINGO3P0C6S8 592 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 CPB1P15086 417 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 CA8P35219 290 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 GRIK1P39086 918 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 MPP1Q00013 466 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 CTBP1Q13363 440 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 SEPT6Q14141 434 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 CMPK2Q5EBM0 449 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 FUT10Q6P4F1 479 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 PRSS55Q6UWB4 352 aaPredicted RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 CLEC14AQ86T13 490 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 SPATA2LQ8IUW3 424 aaPredicted RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 DENND6AQ8IWF6 608 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 CRIPAKQ8N1N5 446 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 LRRC43Q8N309 656 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 BADQ92934 168 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 FAM136AQ96C01 138 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 PGAP3Q96FM1 320 aaPredicted RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 VAT1Q99536 393 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 FICDQ9BVA6 458 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 MRPL9Q9BYD2 267 aaKnown RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 MARCH5Q9NX47 278 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 SFMBT1Q9UHJ3 866 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 CYP11A1P05108 521 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 UBTFL6P0CB48 400 aaPredicted RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 CD1EP15812 388 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 RPL17P18621 184 aaKnown RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 ITGAXP20702 1163 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 EPHA3P29320 983 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 GRIA4P48058 902 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 CSE1LP55060 971 aaKnown RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 BTG3Q14201 252 aaPredicted RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 FSCBQ5H9T9 825 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 RTP2Q5QGT7 225 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 IRGCQ6NXR0 463 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 EPGNQ6UW88 154 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 ZC3HC1Q86WB0 502 aaKnown RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 HPS6Q86YV9 775 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 SPNS2Q8IVW8 549 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 ISL2Q96A47 359 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 YME1L1Q96TA2 773 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 TBL1YQ9BQ87 522 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 ILKAPQ9H0C8 392 aaPredicted RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 DMAP1Q9NPF5 467 aaPredicted RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 TCF7L2Q9NQB0 619 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 RRN3Q9NYV6 651 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 CDH22Q9UJ99 828 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
CUX1-205ENST00000425244 RUVBL2Q9Y230 463 aaKnown RBP10.8□□□□□ -0.68
CUX1-205ENST00000425244 FNDC1Q4ZHG4 1894 aaPredicted RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 AIM2O14862 343 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 COX4I1P13073 169 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 ALOX15P16050 662 aaPredicted RBP10.79□□□□□ -0.68
CUX1-205ENST00000425244 DNAJB2P25686 324 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 MAGEA8P43361 318 aa10.79□□□□□ -0.68
CUX1-205ENST00000425244 NAGLUP54802 743 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms