RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 TRPC5OSA6NMA1 111 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 EVPLLA8MZ36 301 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 LEUTXA8MZ59 168 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 FAM25AB3EWG3 89 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 FAM25CB3EWG5 89 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 FAM25GB3EWG6 89 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 POLRMTO00411 1230 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 IL18RAPO95256 599 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 MT-CO1P00395 513 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 CSF2P04141 144 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 CYBBP04839 570 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 FDX1P10109 184 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 BMP3P12645 472 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 STMN1P16949 149 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 HSPA13P48723 471 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 PLA2G16P53816 162 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 FAPQ12884 760 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 SMAD4Q13485 552 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 CALCRLQ16602 461 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 VARS2Q5ST30 1063 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 LRRC8EQ6NSJ5 796 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 SHQ1Q6PI26 577 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 IFNEQ86WN2 208 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 AFAP1L2Q8N4X5 818 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 GRPEL2Q8TAA5 225 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 LARP4BQ92615 738 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 PROX1Q92786 737 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 RPL3LQ92901 407 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ATXN7L3BQ96GX2 97 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 GAD1Q99259 594 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 BCL7BQ9BQE9 202 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 PYM1Q9BRP8 204 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ADI1Q9BV57 179 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 CEP41Q9BYV8 373 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 SYBUQ9NX95 663 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 IFT80Q9P2H3 777 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 TMPRSS11EQ9UL52 423 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 HMX3A6NHT5 357 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ZBTB5O15062 677 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 TO15178 435 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ATG13O75143 517 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 INMTO95050 263 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 GLRA2P23416 452 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 GCLMP48507 274 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 MFAP3P55082 362 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 PRSS12P56730 875 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 GALNT2Q10471 571 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 PPP1R8Q12972 351 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 SP140Q13342 867 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 SIX1Q15475 284 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 STXBP2Q15833 593 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 BTBD16Q32M84 506 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 PTCHD3Q3KNS1 767 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ESCO2Q56NI9 601 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 METTL11BQ5VVY1 283 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 TATDN1Q6P1N9 297 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 CHSY3Q70JA7 882 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 GPBP1Q86WP2 473 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 C3orf58Q8NDZ4 430 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 SHCBP1Q8NEM2 672 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 OR10Z1Q8NGY1 313 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ZNF564Q8TBZ8 553 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 DEDD2Q8WXF8 326 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 SYN2Q92777 582 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 CNDP1Q96KN2 507 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 CAMKK2Q96RR4 588 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 C19orf43Q9BQ61 176 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 WDR12Q9GZL7 423 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 PITHD1Q9GZP4 211 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 PIF1Q9H611 641 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 TSR3Q9UJK0 312 aaKnown RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ANAPC7Q9UJX3 599 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ATXN7L1Q9ULK2 861 aaPredicted RBP6.92□□□□□ -1.3
CNOT4-205ENST00000423368 ZNF652Q9Y2D9 606 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 KLHL20Q9Y2M5 609 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 LAMA4Q16363 1823 aa6.92□□□□□ -1.3
CNOT4-205ENST00000423368 CLRN2A0PK11 232 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 DENND3A2RUS2 1198 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 SDR42E2A6NKP2 422 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 CTDSP2O14595 271 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 SCAMP3O14828 347 aaKnown RBP6.91□□□□□ -1.3
CNOT4-205ENST00000423368 RETP07949 1114 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 MAPK1P28482 360 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 CHRNA5P30532 468 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 MAPK4P31152 587 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 ZNF76P36508 570 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 HSD17B2P37059 387 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 GARSP41250 739 aaKnown RBP6.91□□□□□ -1.3
CNOT4-205ENST00000423368 LIFRP42702 1097 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 SLC10A2Q12908 348 aaPredicted RBP6.91□□□□□ -1.3
CNOT4-205ENST00000423368 NFE2L1Q14494 772 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 ACAP2Q15057 778 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 ACOX1Q15067 660 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 ZNF568Q3ZCX4 644 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 ALFQ53S48 1182 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 SNX20Q7Z614 316 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 ARHGEF19Q8IW93 802 aa6.91□□□□□ -1.3
CNOT4-205ENST00000423368 BLIDQ8IZY5 108 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms