RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 NEPROQ6NW34 567 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ADGRA1Q86SQ6 560 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TBC1D3Q8IZP1 549 aaPredicted RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 DSELQ8IZU8 1212 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 ZCCHC9Q8N567 271 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 SRFBP1Q8NEF9 429 aaKnown RBP11.22□□□□□ -0.61
FN1-207ENST00000421182 TRPM4Q8TD43 1214 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 SLC38A2Q96QD8 506 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 SH3GL3Q99963 347 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 DCLRE1BQ9H816 532 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TPRKBQ9Y3C4 175 aa11.22□□□□□ -0.61
FN1-207ENST00000421182 TRIM24O15164 1050 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 ZNF621Q6ZSS3 439 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 FAM228AQ86W67 206 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 FAM20CQ8IXL6 584 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 CYP4X1Q8N118 509 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 RNASE11Q8TAA1 199 aaKnown RBP11.21□□□□□ -0.61
FN1-207ENST00000421182 METTL21AQ8WXB1 218 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 FAM136AQ96C01 138 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 MRPL57Q9BQC6 102 aaKnown RBP11.21□□□□□ -0.61
FN1-207ENST00000421182 MYLK2Q9H1R3 596 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 SEMA3GQ9NS98 782 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 RABGEF1Q9UJ41 708 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 VPS4AQ9UN37 437 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 PEX1O43933 1283 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 SLC20A2Q08357 652 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 E2F4Q16254 413 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 LRRC36Q1X8D7 754 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 TRIM40Q6P9F5 258 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 EBNA1BP2Q99848 306 aaKnown RBP11.21□□□□□ -0.61
FN1-207ENST00000421182 DNAJC16Q9Y2G8 782 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 C4BP0C0L5 1744 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 GLRA2P23416 452 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 AQP5P55064 265 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 ST3GAL1Q11201 340 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 ITGADQ13349 1161 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 INAQ16352 499 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 CRY2Q49AN0 593 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 PPP2R2DQ66LE6 453 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 EIF1ADQ8N9N8 165 aaKnown RBP11.21□□□□□ -0.61
FN1-207ENST00000421182 GPR20Q99678 358 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 PCDHA2Q9Y5H9 948 aa11.21□□□□□ -0.61
FN1-207ENST00000421182 LOC100653049A0A140TA62 436 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 USP27XA6NNY8 438 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 SLC25A14O95258 325 aaPredicted RBP11.21□□□□□ -0.62
FN1-207ENST00000421182 GABRR2P28476 465 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 HOXC12P31275 282 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 RPIAP49247 311 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 IRGQQ8WZA9 623 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 NRDE2Q9H7Z3 1164 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 PDP2Q9P2J9 529 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 DDX20Q9UHI6 824 aaKnown RBP11.21□□□□□ -0.62
FN1-207ENST00000421182 KDM3BQ7LBC6 1761 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 CRYBG1Q9Y4K1 1723 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 PER2O15055 1255 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 OTCP00480 354 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 ATP6V0D1P61421 351 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 KCNA10Q16322 511 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 GET4Q7L5D6 327 aaPredicted RBP11.21□□□□□ -0.62
FN1-207ENST00000421182 VN1R5Q7Z5H4 357 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 C11orf74Q86VG3 221 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 RDH11Q8TC12 318 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 ASZ1Q8WWH4 475 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 KLRG1Q96E93 195 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 C9orf16Q9BUW7 83 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 PCBD2Q9H0N5 130 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 RXFP1Q9HBX9 757 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 RCOR3Q9P2K3 495 aaPredicted RBP11.21□□□□□ -0.62
FN1-207ENST00000421182 VAV3Q9UKW4 847 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 MRC1P22897 1456 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.62
FN1-207ENST00000421182 KLHL41O60662 606 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 HLA-DQA2P01906 255 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 SMAD3P84022 425 aaKnown RBP11.21□□□□□ -0.62
FN1-207ENST00000421182 PFKPQ01813 784 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 IRF8Q02556 426 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 SLC25A52Q3SY17 297 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 POTEHQ6S545 545 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 CASKIN2Q8WXE0 1202 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 CAVIN3Q969G5 261 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 PLD4Q96BZ4 506 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 CRELD1Q96HD1 420 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 REEP1Q9H902 201 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 CROTQ9UKG9 612 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 SLC9A8Q9Y2E8 581 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 PCDHB1Q9Y5F3 818 aa11.21□□□□□ -0.62
FN1-207ENST00000421182 GSAPA4D1B5 854 aa11.2□□□□□ -0.62
FN1-207ENST00000421182 PSMD10O75832 226 aa11.2□□□□□ -0.62
FN1-207ENST00000421182 LTA4HP09960 611 aaKnown RBP11.2□□□□□ -0.62
FN1-207ENST00000421182 RFC2P35250 354 aa11.2□□□□□ -0.62
FN1-207ENST00000421182 XKR4Q5GH76 650 aa11.2□□□□□ -0.62
FN1-207ENST00000421182 OLFML2BQ68BL8 750 aa11.2□□□□□ -0.62
FN1-207ENST00000421182 FERD3LQ96RJ6 166 aa11.2□□□□□ -0.62
FN1-207ENST00000421182 SERPINB7O75635 380 aa11.2□□□□□ -0.62
FN1-207ENST00000421182 ATG7O95352 703 aa11.2□□□□□ -0.62
FN1-207ENST00000421182 TPP2P29144 1249 aaPredicted RBP11.2□□□□□ -0.62
FN1-207ENST00000421182 OR1D2P34982 312 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms