RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 BRCC3P46736 316 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 LHX1P48742 406 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 GRM2Q14416 872 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 INTS6LQ5JSJ4 861 aaKnown RBP14.64□□□□□ -0.07
HDAC9-208ENST00000417496 C6orf52Q5T4I8 152 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 MAP3K21Q5TCX8 1036 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 SPATA31D4Q6ZUB0 917 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 LINC00523Q86TU6 105 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 LDB1Q86U70 411 aaPredicted RBP14.64□□□□□ -0.07
HDAC9-208ENST00000417496 ATPAF2Q8N5M1 289 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 CPSF7Q8N684 471 aaKnown RBP14.64□□□□□ -0.07
HDAC9-208ENST00000417496 RDH11Q8TC12 318 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 SMARCD1Q96GM5 515 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 PTPN18Q99952 460 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 PCDHAC1Q9H158 963 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 ADA2Q9NZK5 511 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 PRPF19Q9UMS4 504 aaKnown RBP14.64□□□□□ -0.07
HDAC9-208ENST00000417496 TBC1D30Q9Y2I9 924 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 KIF3CO14782 793 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 CRTAMO95727 393 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 HLA-DQB2P05538 268 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 IYDQ6PHW0 289 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 LRRTM3Q86VH5 581 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 SPATA24Q86W54 205 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 ZFAND2BQ8WV99 257 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 NMD3Q96D46 503 aaKnown RBP14.64□□□□□ -0.07
HDAC9-208ENST00000417496 PHF21BQ96EK2 531 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 FSD1LQ9BXM9 530 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 EFCAB1Q9HAE3 211 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 GLOD4Q9HC38 313 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 RBM22Q9NW64 420 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC9-208ENST00000417496 C6orf203Q9P0P8 240 aaPredicted RBP14.64□□□□□ -0.07
HDAC9-208ENST00000417496 CPA4Q9UI42 421 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 ST3GAL5Q9UNP4 418 aa14.64□□□□□ -0.07
HDAC9-208ENST00000417496 AAR2Q9Y312 384 aaKnown RBP14.64□□□□□ -0.07
HDAC9-208ENST00000417496 C17orf102A2RUQ5 167 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 ARL5CA6NH57 179 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 F8W810 466 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 PEX1O43933 1283 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 PAGE1O75459 146 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 ATP6V1B1P15313 513 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 C1QTNF8P60827 252 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 PGAM4Q8N0Y7 254 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 SH3RF2Q8TEC5 729 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 OLFM1Q99784 485 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 SEMA6AQ9H2E6 1030 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 FAM105AQ9NUU6 356 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 RIMS3Q9UJD0 308 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 MID2Q9UJV3 735 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 TTC3P53804 2025 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 SDHDO14521 159 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 B3GAT3O94766 335 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 POMCP01189 267 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 ME2P23368 584 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 HADHAP40939 763 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 XIAPP98170 497 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 CDKL1Q00532 357 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 AP1ARQ63HQ0 302 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 FCRL2Q96LA5 508 aaPredicted RBP14.63□□□□□ -0.07
HDAC9-208ENST00000417496 MRPL46Q9H2W6 279 aaKnown RBP14.63□□□□□ -0.07
HDAC9-208ENST00000417496 CCDC167Q9P0B6 97 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 FBXO5Q9UKT4 447 aa14.63□□□□□ -0.07
HDAC9-208ENST00000417496 DOCK3Q8IZD9 2030 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 ATP6AP2A0A1C7CYW4 349 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 CACNG3O60359 315 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 ATP6AP2O75787 350 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 RNASEH2AO75792 299 aaKnown RBP14.62□□□□□ -0.07
HDAC9-208ENST00000417496 CSPG5O95196 566 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 PABPC4LP0CB38 370 aaKnown RBP14.62□□□□□ -0.07
HDAC9-208ENST00000417496 SMIM18P0DKX4 95 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 MAXP61244 160 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 RALGDSQ12967 914 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 ADGRE1Q14246 886 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 RBBP5Q15291 538 aaKnown RBP14.62□□□□□ -0.07
HDAC9-208ENST00000417496 LAYNQ6UX15 382 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 PPHLN1Q8NEY8 458 aaKnown RBP14.62□□□□□ -0.07
HDAC9-208ENST00000417496 HMGCLL1Q8TB92 370 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 GTF3C2Q8WUA4 911 aaPredicted RBP14.62□□□□□ -0.07
HDAC9-208ENST00000417496 ATP6V1E2Q96A05 226 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 SPON1Q9HCB6 807 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 TRPC7Q9HCX4 862 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 NCKIPSDQ9NZQ3 722 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 VTI1BQ9UEU0 232 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 CDH9Q9ULB4 789 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 TCAF1Q9Y4C2 921 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 AP4B1Q9Y6B7 739 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 HAS3O00219 553 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 ACOT8O14734 319 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 CCNCP24863 283 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 SULT2A1Q06520 285 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 PTK2BQ14289 1009 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 NRF1Q16656 503 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 RARS2Q5T160 578 aaKnown RBP14.62□□□□□ -0.07
HDAC9-208ENST00000417496 IL23RQ5VWK5 629 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 C14orf80Q86SX3 495 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 CNTN4Q8IWV2 1026 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 PDCD6IPQ8WUM4 868 aaKnown RBP14.62□□□□□ -0.07
HDAC9-208ENST00000417496 MRGPRX2Q96LB1 330 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 BTBD9Q96Q07 612 aa14.62□□□□□ -0.07
HDAC9-208ENST00000417496 FCRL5Q96RD9 977 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms