RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ARMCX6Q7L4S7 300 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 TEX26Q8N6G2 289 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 GPR161Q8N6U8 529 aaKnown RBP23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 HCAR2Q8TDS4 363 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 MAML1Q92585 1016 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 ZNF641Q96N77 438 aaPredicted RBP23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 HEMGNQ9BXL5 484 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 OSBPL8Q9BZF1 889 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 ARRDC1-AS1Q9H2J1 176 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 ATP13A3Q9H7F0 1226 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 PACSIN2Q9UNF0 486 aaPredicted RBP23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 EML5Q05BV3 1969 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3DA0A087WVF3 549 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3IA0A087WXS9 549 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3EA0A087X179 549 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3KA0A087X1G2 549 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3FA6NER0 549 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3LB9A6J9 549 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 PLK4O00444 970 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 PLRG1O43660 514 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 LRP3O75074 770 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TJP3O95049 919 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3HP0C7X1 549 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 PYGMP11217 842 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 ADPRHP54922 357 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 AP1B1Q10567 949 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 AGBL4Q5VU57 503 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 DCAF12L1Q5VU92 463 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3GQ6DHY5 549 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3CQ6IPX1 549 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 NCEH1Q6PIU2 408 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 SYT12Q8IV01 421 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 SLC41A1Q8IVJ1 513 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 RGL4Q8IZJ4 473 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 TBC1D3Q8IZP1 549 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 PIGKQ92643 395 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 RAB7BQ96AH8 199 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 KLHL32Q96NJ5 620 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 LGMNQ99538 433 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 KCNF1Q9H3M0 494 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 C6orf106Q9H6K1 298 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 RBM22Q9NW64 420 aaKnown RBP eCLIP23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 DKK3Q9UBP4 350 aa23.38■■□□□ 1.33
SMARCB1-205ENST00000417137 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 C16orf96A6NNT2 1141 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 INSIG1O15503 277 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 DDX3YO15523 660 aaKnown RBP23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 CES1P23141 567 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 SERPINA4P29622 427 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 HOXD12P35452 270 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 BCL2L1Q07817 233 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 RPS6KA1Q15418 735 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 CFAP58Q5T655 872 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 PIP5KL1Q5T9C9 394 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 KIAA0895LQ68EN5 471 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 RABEPKQ7Z6M1 372 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 OLFM3Q96PB7 478 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 NUDCD1Q96RS6 583 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 MGME1Q9BQP7 344 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 SUV39H2Q9H5I1 410 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 PREBQ9HCU5 417 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 NT5MQ9NPB1 228 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 SCUBE2Q9NQ36 999 aa23.37■■□□□ 1.33
SMARCB1-205ENST00000417137 PLXND1Q9Y4D7 1925 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 APOC4-APOC2K7ER74 178 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 MUSKO15146 869 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 FSBPO95073 299 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 APOC2P02655 101 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 ADRB3P13945 408 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 ITPKAP23677 461 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 MPLP40238 635 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 RGRP47804 291 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 CCR5P51681 352 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 ITKQ08881 620 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 MEI1Q5TIA1 1274 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 NEK5Q6P3R8 708 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 TTC7BQ86TV6 843 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 PAF1Q8N7H5 531 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 TFB1MQ8WVM0 346 aaKnown RBP23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 DNASE2BQ8WZ79 361 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 POLR1EQ9GZS1 481 aaKnown RBP23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 VPS45Q9NRW7 570 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 SAE1Q9UBE0 346 aaPredicted RBP23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 SUSD2Q9UGT4 822 aa23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 PTPRZ1P23471 2315 aaPredicted RBP23.36■■□□□ 1.33
SMARCB1-205ENST00000417137 NYNRINQ9P2P1 1898 aaKnown RBP23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 GOLGA6L9A6NEM1 432 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 RNF103O00237 685 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 MTSS1O43312 755 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 FOXD2O60548 495 aaPredicted RBP23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 GNSP15586 552 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 XPAP23025 273 aaPredicted RBP23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 SUOXP51687 545 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 ADCY2Q08462 1091 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 BRAT1Q6PJG6 821 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 PARS2Q7L3T8 475 aaKnown RBP23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 PGBD5Q8N414 524 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 CEP76Q8TAP6 659 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 SNX19Q92543 992 aa23.35■■□□□ 1.33
SMARCB1-205ENST00000417137 PILRBQ9UKJ0 227 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms