RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 HDAC10Q969S8 669 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 GTPBP2Q9BX10 602 aaKnown RBP8.25□□□□□ -1.09
TRA2B-204ENST00000414862 SLC46A2Q9BY10 475 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 ECT2Q9H8V3 914 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 PTPRHQ9HD43 1115 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 GJB4Q9NTQ9 266 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 TDP1Q9NUW8 608 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 CNOT11Q9UKZ1 510 aaKnown RBP8.25□□□□□ -1.09
TRA2B-204ENST00000414862 CCL26Q9Y258 94 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 SIK3Q9Y2K2 1263 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 CYP46A1Q9Y6A2 500 aa8.25□□□□□ -1.09
TRA2B-204ENST00000414862 NUP210Q8TEM1 1887 aaPredicted RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 TOM1L1O75674 476 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 REC8O95072 547 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 CXCL8P10145 99 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 ATF6P18850 670 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 TYMPP19971 482 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 COMTP21964 271 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 PROZP22891 400 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 RPA1P27694 616 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 LRPAP1P30533 357 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 PTPN7P35236 360 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 MATR3P43243 847 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 NPTX2P47972 431 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 SLC6A9P48067 706 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 PEX3P56589 373 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 GFPT1Q06210 699 aaPredicted RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 MRPL49Q13405 166 aaKnown RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 ZNF268Q14587 947 aaPredicted RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 NFE2Q16621 373 aaPredicted RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 FAM214AQ32MH5 1076 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 SLC39A12Q504Y0 691 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 PRAMEF14Q5SWL7 426 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 NAIF1Q69YI7 327 aaPredicted RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 RABEPKQ7Z6M1 372 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 PIP4P1Q86T03 277 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 CEP76Q8TAP6 659 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 C2orf15Q8WU43 125 aaKnown RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 MTMR9Q96QG7 549 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 BHMT2Q9H2M3 363 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 FBRSL1Q9HCM7 1045 aaKnown RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 KMT5AQ9NQR1 393 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 DUS2Q9NX74 493 aaKnown RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 BCCIPQ9P287 314 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 TBX20Q9UMR3 447 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 UBQLN1Q9UMX0 589 aaKnown RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 SH3BP1Q9Y3L3 701 aa8.24□□□□□ -1.09
TRA2B-204ENST00000414862 ATXN2Q99700 1313 aaKnown RBP8.24□□□□□ -1.09
TRA2B-204ENST00000414862 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 CYP3A5P20815 502 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 MUTP22033 750 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 PAX3P23760 479 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 NMT1P30419 496 aaKnown RBP8.23□□□□□ -1.09
TRA2B-204ENST00000414862 MCM7P33993 719 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 SMARCB1Q12824 385 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 BYSLQ13895 437 aaKnown RBP8.23□□□□□ -1.09
TRA2B-204ENST00000414862 TRIM29Q14134 588 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 SPDYCQ5MJ68 293 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 KRTAP1-3Q8IUG1 177 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 RHOT1Q8IXI2 618 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 OR10T2Q8NGX3 314 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 OSCP1Q8WVF1 389 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 LRIG1Q96JA1 1093 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 MANSC1Q9H8J5 431 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 PLEKHA5Q9HAU0 1116 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 TRPC7Q9HCX4 862 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 ORC3Q9UBD5 711 aaPredicted RBP8.23□□□□□ -1.09
TRA2B-204ENST00000414862 ST6GALNAC2Q9UJ37 374 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 PCDHA13Q9Y5I0 950 aa8.23□□□□□ -1.09
TRA2B-204ENST00000414862 ASCC3Q8N3C0 2202 aaKnown RBP8.23□□□□□ -1.09
TRA2B-204ENST00000414862 TRAV19A0A0A6YYK7 116 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 CLDN3O15551 220 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 AP5Z1O43299 807 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 NFATC1O95644 943 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 CLTAP09496 248 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 OR52Z1P0C646 297 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 CCT6AP40227 531 aaKnown RBP8.22□□□□□ -1.09
TRA2B-204ENST00000414862 P2RY2P41231 377 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 PTGER3P43115 390 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 HHEXQ03014 270 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 SPAG1Q07617 926 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 KYAT1Q16773 422 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 DUOXA1Q1HG43 343 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 C3orf36Q3SXR2 165 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 HS1BP3Q53T59 392 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 TXNDC8Q6A555 127 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 MON1AQ86VX9 555 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 METTL23Q86XA0 190 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 DIS3L2Q8IYB7 885 aaKnown RBP8.22□□□□□ -1.09
TRA2B-204ENST00000414862 MINDY1Q8N5J2 469 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 FBXO18Q8NFZ0 1043 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 SPPL2BQ8TCT7 592 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 CYFIP2Q96F07 1278 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 BICD1Q96G01 975 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 WWC2-AS2Q96NR7 200 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 ZCWPW1Q9H0M4 648 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 TMEM60Q9H2L4 133 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 DEF6Q9H4E7 631 aa8.22□□□□□ -1.09
TRA2B-204ENST00000414862 LDAHQ9H6V9 325 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms