RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 NEK5Q6P3R8 708 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 MARCH9Q86YJ5 346 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 ARHGAP12Q8IWW6 846 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 EID2Q8N6I1 236 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 NPWQ8N729 165 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 TSEN2Q8NCE0 465 aaKnown RBP10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 OR13H1Q8NG92 308 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 OR8K1Q8NGG5 319 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 IQCDQ96DY2 449 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 CHP1Q99653 195 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 WRAP53Q9BUR4 548 aaKnown RBP10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 DEF6Q9H4E7 631 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 SP110Q9HB58 689 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 CTTNBP2NLQ9P2B4 639 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 LHX3Q9UBR4 397 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 IP6K2Q9UHH9 426 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 TPX2Q9ULW0 747 aaKnown RBP10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 WASF3Q9UPY6 502 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 PCDH15Q96QU1 1955 aa10.32□□□□□ -0.76
NCKIPSD-202ENST00000413374 H3BRJ5 948 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 MYO1FO00160 1098 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 DFNA5O60443 496 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 BUB1BO60566 1050 aaPredicted RBP10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 PRAMEF11O60813 436 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 CD48P09326 243 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 XPAP23025 273 aaPredicted RBP10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 HTR7P34969 479 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 ARL4AP40617 200 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 GRK6P43250 576 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 RGRP47804 291 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 RPS21P63220 83 aaKnown RBP10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 SHC2P98077 582 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 MMRN1Q13201 1228 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 DPYSQ14117 519 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 KRT81Q14533 505 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 BOLA3Q53S33 107 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 Q6ZSR6 202 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 POLNQ7Z5Q5 900 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 CAMK1DQ8IU85 385 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 VSTM4Q8IW00 320 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 PAF1Q8N7H5 531 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 ZNF564Q8TBZ8 553 aaPredicted RBP10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 SAP25Q8TEE9 199 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 CASKIN2Q8WXE0 1202 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 LRIG1Q96JA1 1093 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 BMFQ96LC9 184 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 CDC6Q99741 560 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 PDFQ9HBH1 243 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 PCDH18Q9HCL0 1135 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 ZNHIT6Q9NWK9 470 aaKnown RBP10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 DONSONQ9NYP3 566 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 IPO11Q9UI26 975 aaKnown RBP10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 APOBEC2Q9Y235 224 aaKnown RBP10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 SPTBN2O15020 2390 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 NCOR2Q9Y618 2525 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 CEP192Q8TEP8 1941 aa10.31□□□□□ -0.76
NCKIPSD-202ENST00000413374 CXorf51AA0A1B0GTR3 108 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 POM121BA6NF01 834 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 EIF3CLB5ME19 914 aaKnown RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 MUSKO15146 869 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 SPINT1O43278 529 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 TSPAN6O43657 245 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 AKR1B10O60218 316 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 PCDHGA12O60330 932 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 MAGEC1O60732 1142 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 LDOC1O95751 146 aaPredicted RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 TPM1P09493 284 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 EPHA8P29322 1005 aaPredicted RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 HNRNPH3P31942 346 aaKnown RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 NUDT1P36639 197 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 HCAR3P49019 387 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 ARRB1P49407 418 aaPredicted RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 SCNN1BP51168 640 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 CDH6P55285 790 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 DNAJC3Q13217 504 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 ACAP1Q15027 740 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 DPYSL2Q16555 572 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 ST3GAL2Q16842 350 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 TMEM259Q4ZIN3 620 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 AFMIDQ63HM1 303 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 KIAA1161Q6NSJ0 714 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 TMCO3Q6UWJ1 677 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 GCNT7Q6ZNI0 430 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 PTAR1Q7Z6K3 402 aaPredicted RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 SRLQ86TD4 932 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 IQCHQ86VS3 1027 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 PSTKQ8IV42 348 aaKnown RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 TMEM145Q8NBT3 493 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 LRRN4Q8WUT4 740 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 CNDP2Q96KP4 475 aaKnown RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 CSPG4P5Q96PW8 444 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 EIF3CQ99613 913 aaKnown RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 CINPQ9BW66 212 aaPredicted RBP10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 OSBPL1AQ9BXW6 950 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 SUV39H2Q9H5I1 410 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 ABHD10Q9NUJ1 306 aa10.3□□□□□ -0.76
NCKIPSD-202ENST00000413374 SPTLC3Q9NUV7 552 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms