RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 GBP2P32456 591 aaPredicted RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 GJC1P36383 396 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 NUDT1P36639 197 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 PIGAP37287 484 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ITGAEP38570 1179 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF132P52740 706 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 TFDP1Q14186 410 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 HNF4GQ14541 408 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 NEUROD2Q15784 382 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGFBP7Q16270 282 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 C3AR1Q16581 482 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CDKN3Q16667 212 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 PTPROQ16827 1216 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZSCAN23Q3MJ62 389 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 SGO1Q5FBB7 561 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 DNTTIP2Q5QJE6 756 aaKnown RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CATSPEREQ5SY80 951 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 FAM182AQ5T1J6 154 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 GJC2Q5T442 439 aaPredicted RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 LINC00242Q5T6M2 205 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 L1TD1Q5T7N2 865 aaKnown RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 DCLRE1AQ6PJP8 1040 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZNF600Q6ZNG1 722 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 PAQR9Q6ZVX9 377 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 Q6ZWC4 215 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ADM2Q7Z4H4 148 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 RABEPKQ7Z6M1 372 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 PXKQ7Z7A4 578 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 DPP9Q86TI2 863 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 DDX42Q86XP3 938 aaKnown RBP eCLIP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 C16orf71Q8IYS4 520 aaPredicted RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 GPC2Q8N158 579 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CHCHD4Q8N4Q1 142 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ESX1Q8N693 406 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZMIZ2Q8NF64 920 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 LILRB4Q8NHJ6 448 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 BCAS4Q8TDM0 211 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CACNG8Q8WXS5 425 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 TNFRSF14Q92956 283 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 PPP1R14AQ96A00 147 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 RRNAD1Q96FB5 475 aaKnown RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 WDFY2Q96P53 400 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 OSBPL9Q96SU4 736 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 NOL10Q9BSC4 688 aaKnown RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 MRI1Q9BV20 369 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 LRRCC1Q9C099 1032 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 TMEM39BQ9GZU3 492 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ARRDC1-AS1Q9H2J1 176 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 FGF22Q9HCT0 170 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 PAPOLBQ9NRJ5 636 aaKnown RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 MARCH4Q9P2E8 410 aaPredicted RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 AGO2Q9UKV8 859 aaKnown RBP-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 PSG11Q9UQ72 335 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ERVW-1Q9UQF0 538 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 CD2APQ9Y5K6 639 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 ADGRA3Q8IWK6 1321 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 KIAA2026Q5HYC2 2103 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 TRRAPQ9Y4A5 3859 aa-1.46□□□□□ -2.64
RNU4-88P-201ENST00000411220 DMXL1Q9Y485 3027 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PRAG1Q86YV5 1406 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 DENND4AQ7Z401 1863 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 GIMAP1-GIMAP5A0A087WTJ2 511 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 IGKV2D-26A0A0A0MRZ7 120 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 A0A0D9SG42 100 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CFAP69A5D8W1 941 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 SIGLEC16A6NMB1 481 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 HEPACAM2A8MVW5 462 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 E7ENX8 843 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 F5H697 171 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 H7C1D1 291 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 FXYD1O00168 92 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 SCDO00767 359 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PLD2O14939 933 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ZSCAN9O15535 394 aaPredicted RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 PRPF4O43172 522 aaKnown RBP eCLIP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 TGFB1I1O43294 461 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CCP110O43303 1012 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 MSI1O43347 362 aaKnown RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ICMTO60725 284 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 UFL1O94874 794 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 GLSO94925 669 aaPredicted RBP-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 MOCS3O95396 460 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 LARGE1O95461 756 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 MT1AP04731 61 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CISD3P0C7P0 127 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 AADACP22760 399 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ABCD3P28288 659 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 TACR3P29371 465 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 USP8P40818 1118 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 MTHFRP42898 656 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 NPBWR1P48145 328 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CDK7P50613 346 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CLCN2P51788 898 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 ITGA8P53708 1063 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 GALK2Q01415 458 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 TAP2Q03519 686 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 TLE1Q04724 770 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 CD164Q04900 197 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 GALNT2Q10471 571 aa-1.47□□□□□ -2.64
RNU4-88P-201ENST00000411220 MERTKQ12866 999 aa-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms