RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 DPYSQ14117 519 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 ACAP1Q15027 740 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 TXNRD3NBQ6F5E7 133 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 ALKBH5Q6P6C2 394 aaKnown RBP17.96■□□□□ 0.47
LSM5-204ENST00000409909 GDPD4Q6W3E5 623 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 ARHGAP12Q8IWW6 846 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 NPWQ8N729 165 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 ARHGEF26Q96DR7 871 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 KLHDC7BQ96G42 594 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 GDAP1L1Q96MZ0 367 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 TMEM121BQ9BXQ6 578 aaPredicted RBP17.96■□□□□ 0.47
LSM5-204ENST00000409909 OSBPL1AQ9BXW6 950 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 UBA2Q9UBT2 640 aaPredicted RBP17.96■□□□□ 0.47
LSM5-204ENST00000409909 GGT7Q9UJ14 662 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 ITM2BQ9Y287 266 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 MFHAS1Q9Y4C4 1052 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 CACNA1BQ00975 2339 aa17.96■□□□□ 0.47
LSM5-204ENST00000409909 ARID1BQ8NFD5 2236 aaPredicted RBP17.95■□□□□ 0.46
LSM5-204ENST00000409909 C1QTNF9BB2RNN3 333 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 DAPK3O43293 454 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 IGSF6O95976 241 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 C1QTNF9P0C862 333 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 HNRNPA2B1P22626 353 aaKnown RBP17.95■□□□□ 0.46
LSM5-204ENST00000409909 EIF4A3P38919 411 aaKnown RBP17.95■□□□□ 0.46
LSM5-204ENST00000409909 ARRB1P49407 418 aaPredicted RBP17.95■□□□□ 0.46
LSM5-204ENST00000409909 CLDN2P57739 230 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 RPS21P63220 83 aaKnown RBP17.95■□□□□ 0.46
LSM5-204ENST00000409909 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
LSM5-204ENST00000409909 SMTNL2Q2TAL5 461 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 CCDC122Q5T0U0 273 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 KIAA1161Q6NSJ0 714 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 GCNT7Q6ZNI0 430 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 TP53INP2Q8IXH6 220 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 ADAMTS14Q8WXS8 1223 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 EXOC2Q96KP1 924 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 NCAPGQ9BPX3 1015 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 NUP85Q9BW27 656 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 SLC17A9Q9BYT1 436 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 TSPY26PQ9H489 355 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 DONSONQ9NYP3 566 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 NEUROG3Q9Y4Z2 214 aa17.95■□□□□ 0.46
LSM5-204ENST00000409909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.95■□□□□ 0.465e-7■■□□□ 14.2
LSM5-204ENST00000409909 FAM221BA6H8Z2 402 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 IGLON5A6NGN9 336 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 ARHGAP42A6NI28 874 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 AREL1O15033 823 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 RAD51BO15315 384 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 DKK1O94907 266 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 PAK4O96013 591 aaPredicted RBP17.94■□□□□ 0.46
LSM5-204ENST00000409909 TPM3P06753 285 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 THEGLP0DJG4 465 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 EPHA8P29322 1005 aaPredicted RBP17.94■□□□□ 0.46
LSM5-204ENST00000409909 AKT2P31751 481 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 PIGHQ14442 188 aaPredicted RBP17.94■□□□□ 0.46
LSM5-204ENST00000409909 DPYSL2Q16555 572 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 BOLA3Q53S33 107 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 LRRC73Q5JTD7 316 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 ARHGAP36Q6ZRI8 547 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 KANSL1Q7Z3B3 1105 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 NIPA2Q8N8Q9 360 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 OR13H1Q8NG92 308 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 GATA6Q92908 595 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 RAB7BQ96AH8 199 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 BMFQ96LC9 184 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 C1QTNF2Q9BXJ5 285 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 CPEB1Q9BZB8 566 aaKnown RBP17.94■□□□□ 0.46
LSM5-204ENST00000409909 CAAP1Q9H8G2 361 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 ZWILCHQ9H900 591 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 ANAPC7Q9UJX3 599 aa17.94■□□□□ 0.46
LSM5-204ENST00000409909 APOBEC2Q9Y235 224 aaKnown RBP17.94■□□□□ 0.46
LSM5-204ENST00000409909 GOLGA8CPA6NN73 597 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 YKT6O15498 198 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 TNFSF14O43557 240 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 TSPAN6O43657 245 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 MAGEC1O60732 1142 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 ITGAVP06756 1048 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 RARAP10276 462 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 TIMP2P16035 220 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 ITIH2P19823 946 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 RGRP47804 291 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 ZNF135P52742 658 aaPredicted RBP17.93■□□□□ 0.46
LSM5-204ENST00000409909 RAD51Q06609 339 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 SPECC1LQ69YQ0 1117 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 UNQ6494/PRO21346Q6UXR6 183 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 POLNQ7Z5Q5 900 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 ABI3BPQ7Z7G0 1075 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 TTC7BQ86TV6 843 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 OXR1Q8N573 874 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 HSPH1Q92598 858 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 KLF6Q99612 283 aaPredicted RBP17.93■□□□□ 0.46
LSM5-204ENST00000409909 DNAJC7Q99615 494 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.93■□□□□ 0.46
LSM5-204ENST00000409909 ETNK2Q9NVF9 386 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 IP6K2Q9UHH9 426 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 MSRB2Q9Y3D2 182 aa17.93■□□□□ 0.46
LSM5-204ENST00000409909 POM121BA6NF01 834 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 DFFAO00273 331 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 NEMP1O14524 444 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 CBFA2T2O43439 604 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms