RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ARRDC2Q8TBH0 407 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 ERLEC1Q96DZ1 483 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 MRGPRX1Q96LB2 322 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 OSBPL1AQ9BXW6 950 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 SLC25A51Q9H1U9 297 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 GLOD4Q9HC38 313 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 PPM1HQ9ULR3 514 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 MRFAP1Q9Y605 127 aa16.83■□□□□ 0.28
SUMO1-208ENST00000409627 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.82■□□□□ 0.28
SUMO1-208ENST00000409627 LEFTY1O75610 366 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 GJB3O75712 270 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 ADH1BP00325 375 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 NFKB1P19838 968 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 HOXA6P31267 233 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 GKP32189 559 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 KCNJ1P48048 391 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 NIPAL4Q0D2K0 466 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 CST6Q15828 149 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 SLC14A2Q15849 920 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 FAM46CQ5VWP2 391 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 MMAAQ8IVH4 418 aaKnown RBP16.82■□□□□ 0.28
SUMO1-208ENST00000409627 PIP4K2CQ8TBX8 421 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 CCDC110Q8TBZ0 833 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 GRIN3AQ8TCU5 1115 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 GRK7Q8WTQ7 553 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 HMGB4Q8WW32 186 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 PRCCQ92733 491 aaPredicted RBP16.82■□□□□ 0.28
SUMO1-208ENST00000409627 IMP4Q96G21 291 aaKnown RBP16.82■□□□□ 0.28
SUMO1-208ENST00000409627 FCRL5Q96RD9 977 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 GBA3Q9H227 469 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 ATP13A3Q9H7F0 1226 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 NOD2Q9HC29 1040 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 RSPH14Q9UHP6 348 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 SCML1Q9UN30 329 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 PLXND1Q9Y4D7 1925 aa16.82■□□□□ 0.28
SUMO1-208ENST00000409627 TTC24A2A3L6 582 aaPredicted RBP16.81■□□□□ 0.28
SUMO1-208ENST00000409627 SOCS5O75159 536 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 IL1BP01584 269 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 SERPINF2P08697 491 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 TDGF1P13385 188 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 C5AR1P21730 350 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 SERPINA4P29622 427 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 PSMD8P48556 350 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 NUBP1P53384 320 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 ARSIQ5FYB1 569 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 FAM182AQ5T1J6 154 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 ANO7Q6IWH7 933 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 GSTA5Q7RTV2 222 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 CCDC89Q8N998 374 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 SPATA4Q8NEY3 305 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 MDGA1Q8NFP4 955 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 TADA1Q96BN2 335 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 SIPA1Q96FS4 1042 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 PPP1R16AQ96I34 528 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 NSMCE3Q96MG7 304 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 ZNF641Q96N77 438 aaPredicted RBP16.81■□□□□ 0.28
SUMO1-208ENST00000409627 RUNDC3BQ96NL0 473 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 DDX47Q9H0S4 455 aaKnown RBP16.81■□□□□ 0.28
SUMO1-208ENST00000409627 BCCIPQ9P287 314 aaKnown RBP eCLIP16.81■□□□□ 0.28
SUMO1-208ENST00000409627 EBF1Q9UH73 591 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 FEZ2Q9UHY8 353 aaPredicted RBP16.81■□□□□ 0.28
SUMO1-208ENST00000409627 FBXO4Q9UKT5 387 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 SARDHQ9UL12 918 aa16.81■□□□□ 0.28
SUMO1-208ENST00000409627 EML5Q05BV3 1969 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 ZDBF2Q9HCK1 2354 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 PIGNO95427 931 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 IFNB1P01574 187 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 DNTTP04053 509 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 UGT2B4P06133 528 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 MMP2P08253 660 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 SLC8A1P32418 973 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 ACTN2P35609 894 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 CD86P42081 329 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 SKOR1P84550 965 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 BCL2L1Q07817 233 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 TTC31Q49AM3 519 aaPredicted RBP16.8■□□□□ 0.28
SUMO1-208ENST00000409627 KIAA1324Q6UXG2 1013 aaKnown RBP16.8■□□□□ 0.28
SUMO1-208ENST00000409627 GDPD4Q6W3E5 623 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 ARHGEF18Q6ZSZ5 1173 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 MAML2Q8IZL2 1156 aaPredicted RBP16.8■□□□□ 0.28
SUMO1-208ENST00000409627 HCAR2Q8TDS4 363 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 SLCO2A1Q92959 643 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 PPP1R2P1Q96PQ5 205 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 SLC6A17Q9H1V8 727 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 PABPC3Q9H361 631 aaKnown RBP16.8■□□□□ 0.28
SUMO1-208ENST00000409627 PAK5Q9P286 719 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 PCYOX1Q9UHG3 505 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 CACNA1IQ9P0X4 2223 aa16.8■□□□□ 0.28
SUMO1-208ENST00000409627 CCDC163A0A0D9SF12 145 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 TSPAN11A1L157 253 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 KPNA3O00505 521 aaPredicted RBP16.79■□□□□ 0.28
SUMO1-208ENST00000409627 TRAFD1O14545 582 aaPredicted RBP16.79■□□□□ 0.28
SUMO1-208ENST00000409627 MID1O15344 667 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 HTRA2O43464 458 aaPredicted RBP16.79■□□□□ 0.28
SUMO1-208ENST00000409627 GAS8O95995 478 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 CA4P22748 312 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 ITGB7P26010 798 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 SFSWAPQ12872 951 aaKnown RBP16.79■□□□□ 0.28
SUMO1-208ENST00000409627 IHHQ14623 411 aa16.79■□□□□ 0.28
SUMO1-208ENST00000409627 PARP6Q2NL67 630 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms