RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 RNF43Q68DV7 783 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 ZNF783Q6ZMS7 281 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 GAREM2Q75VX8 874 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 HS6ST3Q8IZP7 471 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 HJURPQ8NCD3 748 aaPredicted RBP19.16■□□□□ 0.66
USP39-202ENST00000409025 ADAMTS19Q8TE59 1207 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 PSKH2Q96QS6 385 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 TCF25Q9BQ70 676 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 FAM167BQ9BTA0 163 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 RHOJQ9H4E5 214 aa19.16■□□□□ 0.66
USP39-202ENST00000409025 LSM7Q9UK45 103 aaKnown RBP19.16■□□□□ 0.66
USP39-202ENST00000409025 H0Y626 953 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 SIN3BO75182 1162 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 PAPSS2O95340 614 aaPredicted RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 TOP3BO95985 862 aaKnown RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 EPOP01588 193 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 F7P08709 466 aaPredicted RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 ATXN1LP0C7T5 689 aaKnown RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 TROVE2P10155 538 aaKnown RBP eCLIP19.15■□□□□ 0.66
USP39-202ENST00000409025 HLA-DPA1P20036 260 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 GLDCP23378 1020 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 MSLNQ13421 630 aaPredicted RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 SLC14A2Q15849 920 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 DBN1Q16643 649 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 LACTB2Q53H82 288 aaPredicted RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 PPM1JQ5JR12 505 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 CXorf57Q6NSI4 855 aaKnown RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 Q6ZNB5 142 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 NLRP9Q7RTR0 991 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 CMC1Q7Z7K0 106 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 TMC8Q8IU68 726 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 GABPB2Q8TAK5 448 aaPredicted RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 RAB3IL1Q8TBN0 382 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 SP7Q8TDD2 431 aaPredicted RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 E2F7Q96AV8 911 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 GCNAQ96QF7 691 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 MECRQ9BV79 373 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 LRRC3Q9BY71 257 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 ACTL7AQ9Y615 435 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 CBX4O00257 560 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 GREM1O60565 184 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 GJB3O75712 270 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 C1RP00736 705 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 FGF1P05230 155 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 BPGMP07738 259 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 ARNTP27540 789 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 CDC25CP30307 473 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 ABCG1P45844 678 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 UBE2Q1Q7Z7E8 422 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 ZC3HC1Q86WB0 502 aaKnown RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 CARNMT1Q8N4J0 409 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 MAB21L3Q8N8X9 362 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 TMA16Q96EY4 203 aaKnown RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 THOC1Q96FV9 657 aaKnown RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 GPR22Q99680 433 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 ACTR5Q9H9F9 607 aaPredicted RBP19.15■□□□□ 0.66
USP39-202ENST00000409025 SIRPGQ9P1W8 387 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 LZTS1Q9Y250 596 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 IRAK3Q9Y616 596 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 SLC4A7Q9Y6M7 1214 aa19.15■□□□□ 0.66
USP39-202ENST00000409025 SCAMP3O14828 347 aaKnown RBP19.14■□□□□ 0.65
USP39-202ENST00000409025 TLL1O43897 1013 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 GLUD1P00367 558 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 IL1BP01584 269 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 CKMP06732 381 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 GSTA1P08263 222 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 CTNNB1P35222 781 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 BMPR1AP36894 532 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 ERVFC1P60507 584 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 LAMB3Q13751 1172 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 GRM3Q14832 879 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 C16orf46Q6P387 395 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 ABCF3Q9NUQ8 709 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 EMCNQ9ULC0 261 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 USH1CQ9Y6N9 552 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 DENND4CQ5VZ89 1909 aa19.14■□□□□ 0.65
USP39-202ENST00000409025 A0A096LPK6 155 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 TRAV19A0A0A6YYK7 116 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 PLIN3O60664 434 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 AHSGP02765 367 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 EN2P19622 333 aaPredicted RBP19.13■□□□□ 0.65
USP39-202ENST00000409025 CES1P23141 567 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 IRX4P78413 519 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 SLC7A9P82251 487 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 TMPRSS15P98073 1019 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 ZXDBP98169 803 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 CHI3L2Q15782 390 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 DENND6AQ8IWF6 608 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 CALML6Q8TD86 181 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 CAB39LQ9H9S4 337 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 SLC39A10Q9ULF5 831 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 ZNF510Q9Y2H8 683 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 SH3BP1Q9Y3L3 701 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 MROH6A6NGR9 719 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 LUC7L3O95232 432 aaKnown RBP19.13■□□□□ 0.65
USP39-202ENST00000409025 MYL4P12829 197 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 ALDH3A1P30838 453 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 POLD2P49005 469 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 CTBP1Q13363 440 aa19.13■□□□□ 0.65
USP39-202ENST00000409025 CYTH1Q15438 398 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms