RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 BRMS1LQ5PSV4 323 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 NCEH1Q6PIU2 408 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 LINGO4Q6UY18 593 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 Q6ZVU0 165 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 DNAAF5Q86Y56 855 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 VPS37AQ8NEZ2 397 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 ANKK1Q8NFD2 765 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 RXFP2Q8WXD0 754 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 SLC6A18Q96N87 628 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 SPAG5Q96R06 1193 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 MUC3BQ9H195 1237 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 PCDH18Q9HCL0 1135 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 NDFIP2Q9NV92 336 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 ZNF212Q9UDV6 495 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 SUSD2Q9UGT4 822 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 ANGPTL2Q9UKU9 493 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 PAIP2BQ9ULR5 123 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 STAP1Q9ULZ2 295 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 TBC1D30Q9Y2I9 924 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 SNX11Q9Y5W9 270 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 ACTL7AQ9Y615 435 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 PKD1L2Q7Z442 2459 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 TARSL2A2RTX5 802 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 DRGXA6NNA5 263 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 C10orf142B7Z368 130 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ANKRD65E5RJM6 399 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 FAM72CH0Y354 149 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ZSCAN12O43309 604 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 BNIP3LO60238 219 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 CLDN11O75508 207 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 MTRF1O75570 445 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SEC31AO94979 1220 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 CTSLP07711 333 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SYPP08247 313 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SRCP12931 536 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 RRM1P23921 792 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SCNN1AP37088 669 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 STAT1P42224 750 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ADPRHP54922 357 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 CDH4P55283 916 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SNX16P57768 344 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 PPP2CBP62714 309 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 PPP2CAP67775 309 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SLC12A1Q13621 1099 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 DLG2Q15700 870 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 CLEC16AQ2KHT3 1053 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 HLA-BQ31612 363 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 FAM72AQ5TYM5 149 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 FAM72DQ6L9T8 149 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 RABEPKQ7Z6M1 372 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 FAM72BQ86X60 149 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ZNF677Q86XU0 584 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 HDDC3Q8N4P3 179 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 CCDC185Q8N715 623 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 OR7D4Q8NG98 312 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 GAREM1Q9H706 876 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 FBRSQ9HAH7 460 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SGK2Q9HBY8 427 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ZNHIT6Q9NWK9 470 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 RRN3Q9NYV6 651 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 VPS51Q9UID3 782 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 TMCO1Q9UM00 188 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 NEU3Q9UQ49 428 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 NYNRINQ9P2P1 1898 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 IGLV3-10A0A075B6K4 115 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 A6NHS1 94 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 C2CD4BA6NLJ0 364 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 EIF3FO00303 357 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ATP9BO43861 1147 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SKAP2O75563 359 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ENDOD1O94919 500 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 RHOCP08134 193 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 RFC1P35251 1148 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ZNF75DP51815 510 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 AFF3P51826 1226 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SIM1P81133 766 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 IL9RQ01113 521 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ELAVL3Q14576 367 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 FXNQ16595 210 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 LONRF2Q1L5Z9 754 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ACCSLQ4AC99 568 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 PRAMEF14Q5SWL7 426 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 E4F1Q66K89 784 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 USP30Q70CQ3 517 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SND1Q7KZF4 910 aaKnown RBP eCLIP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 SH2D3CQ8N5H7 860 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ZBTB8BQ8NAP8 495 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ERGIC2Q96RQ1 377 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 NAP1L3Q99457 506 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 OMDQ99983 421 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 REPIN1Q9BWE0 567 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 RABEP2Q9H5N1 569 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 CAAP1Q9H8G2 361 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 TAS2R14Q9NYV8 317 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ADAM22Q9P0K1 906 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 CIDEBQ9UHD4 219 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 ADAMTS1Q9UHI8 967 aa9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 FBXO9Q9UK97 447 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-202ENST00000409020 PLXNA2O75051 1894 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms