RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 SSBP05455 408 aaKnown RBP eCLIP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 CRHP06850 196 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SPARCP09486 303 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 TFPTP0C1Z6 253 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 RSPH10BP0C881 870 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SPDYE6P0CI01 402 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SKILP12757 684 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NCAM1P13591 858 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ETS1P14921 441 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ZNF250P15622 560 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SLC25A16P16260 332 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NCK1P16333 377 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 TATP17735 454 aaPredicted RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 LAG3P18627 525 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 PCMT1P22061 227 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 PTGS1P23219 599 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 KELP23276 732 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 VAMP1P23763 118 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 FCARP24071 287 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 FPR2P25090 351 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 MAP4P27816 1152 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 PSMB4P28070 264 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NOS3P29474 1203 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 MAN1A1P33908 653 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ADD1P35611 737 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 TIMP3P35625 211 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NNMTP40261 264 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 USP8P40818 1118 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 PEX19P40855 299 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 HADHAP40939 763 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SLC19A1P41440 591 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ECI1P42126 302 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 MCAMP43121 646 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 CTSKP43235 329 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ETV4P43268 484 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 TNFRSF4P43489 277 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 TSFMP43897 325 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 MAPKAPK2P49137 400 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ARRB1P49407 418 aaPredicted RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 CLK2P49760 499 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 TOB1P50616 345 aaPredicted RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 UBE2E1P51965 193 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NUDT6P53370 316 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 CACNB3P54284 484 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 EPHA4P54764 986 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 GAS1P54826 345 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 FOXA1P55317 472 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NANOS3P60323 173 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SEC61BP60468 96 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 BTG1P62324 171 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 RPS4XP62701 263 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 RPL10AP62906 217 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 IRX6P78412 446 aaPredicted RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 EXOSC10Q01780 885 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 POU5F1Q01860 360 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 GAD2Q05329 585 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 CTDSPL2Q05D32 466 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SPAG1Q07617 926 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 PPARAQ07869 468 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ZNF177Q13360 481 aaPredicted RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ZNF211Q13398 564 aaPredicted RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 GAB1Q13480 694 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 GIT2Q14161 759 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 GALNT3Q14435 633 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NEDD9Q14511 834 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 KIR2DS3Q14952 304 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 PDIA6Q15084 440 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SLC9A3R2Q15599 337 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 CDKN3Q16667 212 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ZNF750Q32MQ0 723 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 KRTAP6-2Q3LI66 62 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 CFAP100Q494V2 611 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 TMEM196Q5HYL7 178 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ZC3H12BQ5HYM0 836 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 FAM78AQ5JUQ0 283 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 SPIN3Q5JUX0 258 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 DACT2Q5SW24 774 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NOL9Q5SY16 702 aaKnown RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 CFAP70Q5T0N1 1121 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ATAD3BQ5T9A4 648 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ARHGEF16Q5VV41 709 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 ZKSCAN2Q63HK3 967 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 KANK2Q63ZY3 851 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 WWC2Q6AWC2 1192 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 PPP4R4Q6NUP7 873 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 FAHD2BQ6P2I3 314 aaPredicted RBP-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 TMEM81Q6P7N7 255 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NOTUMQ6P988 496 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 RFWD3Q6PCD5 774 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 MYO7BQ6PIF6 2116 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 FIGNL1Q6PIW4 674 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 Q6Q795 121 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 VITQ6UXI7 678 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 NSMFQ6X4W1 530 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 LDHAL6AQ6ZMR3 332 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 Q6ZRM9 215 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 DNM1P46Q6ZS02 220 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 Q6ZS92 163 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 RNF165Q6ZSG1 346 aa-0.03□□□□□ -2.41
RNU6ATAC11P-201ENST00000408541 STOX1Q6ZVD7 989 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms