RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PLCH1Q4KWH8 1693 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 NRAPQ86VF7 1730 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 KDRP35968 1356 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 TARSL2A2RTX5 802 aaKnown RBP5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 J3KRW8 73 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 RHODO00212 210 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 USP12O75317 370 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 CBX6O95503 412 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 PRR35P0CG20 571 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 CTSAP10619 480 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 CD53P19397 219 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 KLRC2P26717 231 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 CIITAP33076 1130 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 GJC1P36383 396 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 STAT1P42224 750 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 CYP2J2P51589 502 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 RPS13P62277 151 aaKnown RBP5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 TBL3Q12788 808 aaKnown RBP5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 TBX2Q13207 712 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 EIF4A2Q14240 407 aaKnown RBP5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 Q4G0T1 1027 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 MIDNQ504T8 468 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 GJB7Q6PEY0 223 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 ZNF793Q6ZN11 406 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 LRRC8DQ7L1W4 858 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 ADGRG6Q86SQ4 1221 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 CCDC25Q86WR0 208 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 FAM9BQ8IZU0 186 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 TCP11L2Q8N4U5 519 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 BCAS4Q8TDM0 211 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 MPP4Q96JB8 637 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 EYA3Q99504 573 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC26A6Q9BXS9 759 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 SEMA4CQ9C0C4 833 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 PRSS22Q9GZN4 317 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 TTC12Q9H892 705 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 ALKBH4Q9NXW9 302 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 NLKQ9UBE8 527 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 ICKQ9UPZ9 632 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 LAMP3Q9UQV4 416 aa5.35□□□□□ -1.55
HMGB3P19-201ENST00000403971 WNK3Q9BYP7 1800 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 KIAA0232Q92628 1395 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 IGSF1Q8N6C5 1336 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 DPPA5A6NC42 116 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 E5RJQ4 531 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 PER2O15055 1255 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 CD38P28907 300 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 CHRNA5P30532 468 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 C5orf22Q49AR2 442 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 MON1AQ86VX9 555 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 DDIASQ8IXT1 998 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 RFWD2Q8NHY2 731 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 TBC1D22AQ8WUA7 517 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 ZUFSPQ96AP4 578 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 RNF125Q96EQ8 232 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 ZNF419Q96HQ0 510 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 APOPT1Q96IL0 206 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 CD180Q99467 661 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 LBHD1Q9BQE6 289 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 NPLQ9BXD5 320 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 HIPK3Q9H422 1215 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC32A1Q9H598 525 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 CXorf56Q9H5V9 222 aa5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 CNOT7Q9UIV1 285 aaKnown RBP5.34□□□□□ -1.55
HMGB3P19-201ENST00000403971 PARP4Q9UKK3 1724 aaKnown RBP5.34□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZBED9Q6R2W3 1325 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 TRBV5-3A0A0A0MS03 114 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 A0A1W2PPC1 479 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 STRNO43815 780 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 HBP1O60381 514 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 DDAH2O95865 285 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 HLA-DQA2P01906 255 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 TNFAIP3P21580 790 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 KELP23276 732 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 ABCD3P28288 659 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 RPP30P78346 268 aaKnown RBP5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 MPP1Q00013 466 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 ID2Q02363 134 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 PMPCAQ10713 525 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 GPR68Q15743 365 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 SLC18A3Q16572 532 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 SRSF7Q16629 238 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 PLK5Q496M5 336 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 ENTPD8Q5MY95 495 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZNF626Q68DY1 528 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 B4GALNT4Q76KP1 1039 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 UBE2Q1Q7Z7E8 422 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 TEX19Q8NA77 164 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 RAB40AQ8WXH6 277 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 CNOT9Q92600 299 aaKnown RBP5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 MPHOSPH8Q99549 860 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 FUZQ9BT04 418 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 EPHX3Q9H6B9 360 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 PAPOLBQ9NRJ5 636 aaKnown RBP5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 CYP46A1Q9Y6A2 500 aa5.33□□□□□ -1.56
HMGB3P19-201ENST00000403971 PKD1L3Q7Z443 1732 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms