RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 VPS51Q9UID3 782 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 TCAF1Q9Y4C2 921 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 EPOPA6NHQ4 379 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 FAM47DPA6NHR8 397 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 TRIM49D1C9J1S8 452 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 PRPF4O43172 522 aaKnown RBP eCLIP13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 SPAG7O75391 227 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 ATXN1LP0C7T5 689 aaKnown RBP13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 GBP2P32456 591 aaPredicted RBP13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 NSUN2Q08J23 767 aaKnown RBP eCLIP13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 LMAN2Q12907 356 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 ZNF77Q15935 545 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 SIRPB2Q5JXA9 342 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 COL13A1Q5TAT6 717 aaPredicted RBP13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 TMEM25Q86YD3 366 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 VN1R2Q8NFZ6 395 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 ACDQ96AP0 544 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 MTBPQ96DY7 904 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 IFT43Q96FT9 208 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 FEM1CQ96JP0 617 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 C2orf49Q9BVC5 232 aaPredicted RBP13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 LINC00597Q9H2U6 94 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 IL1RAPL1Q9NZN1 696 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 ZFATQ9P243 1243 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 SMG5Q9UPR3 1016 aaKnown RBP13.45□□□□□ -0.26
CEACAM1-206ENST00000403136 NOTCH4Q99466 2003 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 SRRM3A6NNA2 597 aaPredicted RBP13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 TYROBPO43914 113 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 TMCC1O94876 653 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 PLK1P53350 603 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 HSP90AA5PQ58FG0 334 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 TEDDM1Q5T9Z0 273 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 RETSATQ6NUM9 610 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 PACS1Q6VY07 963 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 SH2D5Q6ZV89 423 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 ADGRG2Q8IZP9 1017 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 ANKRD42Q8N9B4 389 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 DENND1AQ8TEH3 1009 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 ATXN2LQ8WWM7 1075 aaKnown RBP13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 IRF7Q92985 503 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 ALKBH8Q96BT7 664 aaKnown RBP13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 SERAC1Q96JX3 654 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 LMLNQ96KR4 655 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 NUDCD1Q96RS6 583 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 RANBP9Q96S59 729 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 CDCA3Q99618 268 aaPredicted RBP13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 C20orf96Q9NUD7 363 aaPredicted RBP13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 NKIRAS1Q9NYS0 192 aa13.44□□□□□ -0.26
CEACAM1-206ENST00000403136 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 HMX2A2RU54 273 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 RFXAPO00287 272 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 MT-CO1P00395 513 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 PENKP01210 267 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 HLA-DPA1P20036 260 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 CNTFP26441 200 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 WEE1P30291 646 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 CD70P32970 193 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SLC18A2Q05940 514 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 USP4Q13107 963 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SLC12A1Q13621 1099 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 PLEKHG6Q3KR16 790 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 GRTP1Q5TC63 336 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 MROH9Q5TGP6 573 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 PDPK2PQ6A1A2 396 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 ESRP1Q6NXG1 681 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 KCNMB4Q86W47 210 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 RASSF3Q86WH2 238 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 BANPQ8N9N5 519 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 MGARPQ8TDB4 240 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 EXOC2Q96KP1 924 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 KLF6Q99612 283 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 CPNE1Q99829 537 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SFXN1Q9H9B4 322 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SPHK2Q9NRA0 654 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SLC17A6Q9P2U8 582 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 ARIH1Q9Y4X5 557 aaPredicted RBP13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 PSAT1Q9Y617 370 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 GBF1Q92538 1859 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 CCDC78A2IDD5 438 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 GOLGA8RI6L899 631 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 NDST3O95803 873 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 FGF1P05230 155 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 GP5P40197 560 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SLC20A2Q08357 652 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 DNAJC3Q13217 504 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SEPT6Q14141 434 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 LRRC14Q15048 493 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SMAD1Q15797 465 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 CNGA3Q16281 694 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 TIFABQ6ZNK6 161 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 CNPY4Q8N129 248 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 CELF5Q8N6W0 485 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 OTUB2Q96DC9 234 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 MRPL38Q96DV4 380 aaKnown RBP13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 SGSM3Q96HU1 749 aa13.43□□□□□ -0.26
CEACAM1-206ENST00000403136 TRIB3Q96RU7 358 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms