RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PRMT8Q9NR22 394 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 IL36AQ9UHA7 158 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 DOCK9Q9BZ29 2069 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 GCATO75600 419 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 IL1BP01584 269 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 ZSCAN5DPP0CG00 497 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 TDGF1P13385 188 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 HSPA9P38646 679 aaKnown RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 CCR3P51677 355 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 RPS14P62263 151 aaKnown RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 DMWDQ09019 674 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 ANO7Q6IWH7 933 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 NCEH1Q6PIU2 408 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 PRPF39Q86UA1 669 aaKnown RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 SPATA4Q8NEY3 305 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 ATL2Q8NHH9 583 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 SPATA22Q8NHS9 363 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 CPEB1Q9BZB8 566 aaKnown RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 GLOD4Q9HC38 313 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 KLHL8Q9P2G9 620 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 EBF1Q9UH73 591 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 PCDHGC4Q9Y5F7 938 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 MRFAP1Q9Y605 127 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 EML5Q05BV3 1969 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 F5H423 210 aaPredicted RBP16.13■□□□□ 0.17
HMGA1-204ENST00000401473 LAMTOR5O43504 91 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 PHF2O75151 1096 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 NEBLO76041 1014 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 PAPSS2O95340 614 aaPredicted RBP16.13■□□□□ 0.17
HMGA1-204ENST00000401473 PIGNO95427 931 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 IFNB1P01574 187 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 RASSF3Q86WH2 238 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 TMIEQ8NEW7 156 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 TSTD1Q8NFU3 115 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 PIP4K2CQ8TBX8 421 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 IMP4Q96G21 291 aaKnown RBP16.13■□□□□ 0.17
HMGA1-204ENST00000401473 CCDC114Q96M63 670 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 SPATA13Q96N96 652 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 GORASP1Q9BQQ3 440 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 SCUBE2Q9NQ36 999 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 TRHDEQ9UKU6 1024 aa16.13■□□□□ 0.17
HMGA1-204ENST00000401473 CFAP69A5D8W1 941 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 TRAFD1O14545 582 aaPredicted RBP16.12■□□□□ 0.17
HMGA1-204ENST00000401473 ALOX15BO15296 676 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 MID1O15344 667 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 GALR2O43603 387 aaPredicted RBP16.12■□□□□ 0.17
HMGA1-204ENST00000401473 METTL18O95568 372 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 MT-CYBP00156 380 aaPredicted RBP16.12■□□□□ 0.17
HMGA1-204ENST00000401473 NFKB1P19838 968 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 SLC8A1P32418 973 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 ANGPT1Q15389 498 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 CST6Q15828 149 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 CAMKK1Q8N5S9 505 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 SIPA1Q96FS4 1042 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 RBM15Q96T37 977 aaKnown RBP eCLIP16.12■□□□□ 0.17
HMGA1-204ENST00000401473 SLC25A51Q9H1U9 297 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 UBP1Q9NZI7 540 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 SERGEFQ9UGK8 458 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 NEU2Q9Y3R4 380 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 GOLGA6L10A0A0M3HER8 536 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 PLK4O00444 970 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 UGT2B4P06133 528 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 DRD3P35462 400 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 CD86P42081 329 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 SKOR1P84550 965 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 CSTF1Q05048 431 aaKnown RBP16.12■□□□□ 0.17
HMGA1-204ENST00000401473 KLHL7Q8IXQ5 586 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 AADATQ8N5Z0 425 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 TADA1Q96BN2 335 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 OXNAD1Q96HP4 312 aaPredicted RBP16.12■□□□□ 0.17
HMGA1-204ENST00000401473 KLHL32Q96NJ5 620 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 FERMT1Q9BQL6 677 aa16.12■□□□□ 0.17
HMGA1-204ENST00000401473 KPNA3O00505 521 aaPredicted RBP16.11■□□□□ 0.17
HMGA1-204ENST00000401473 OPHN1O60890 802 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 APBB3O95704 486 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 PRNPP04156 253 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 PDHA1P08559 390 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 PSMB4P28070 264 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 PSMD8P48556 350 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 FNTAP49354 379 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 AP1S1P61966 158 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 P3H1Q32P28 736 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 ZNF776Q68DI1 518 aaPredicted RBP16.11■□□□□ 0.17
HMGA1-204ENST00000401473 GDPD4Q6W3E5 623 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 GSTA5Q7RTV2 222 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 ZNF572Q7Z3I7 529 aaPredicted RBP16.11■□□□□ 0.17
HMGA1-204ENST00000401473 ZSWIM9Q86XI8 627 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 PGBD3Q8N328 593 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 TAB3Q8N5C8 712 aaPredicted RBP16.11■□□□□ 0.17
HMGA1-204ENST00000401473 FRMD1Q8N878 549 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 PRCCQ92733 491 aaPredicted RBP16.11■□□□□ 0.17
HMGA1-204ENST00000401473 LRIG1Q96JA1 1093 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 FCRL5Q96RD9 977 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 TPSD1Q9BZJ3 242 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 SUV39H2Q9H5I1 410 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 FBRSQ9HAH7 460 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 PCYOX1Q9UHG3 505 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 KNL1Q8NG31 2342 aa16.11■□□□□ 0.17
HMGA1-204ENST00000401473 RNASEH1O60930 286 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms