RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CACNG4Q9UBN1 327 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 H3BQF6 201 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 TM9SF1O15321 606 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 SERPINE1P05121 402 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 HNRNPLP14866 589 aaKnown RBP eCLIP13.88□□□□□ -0.194e-7■□□□□ 10.3
VAPA-202ENST00000400000 FLT3LGP49771 235 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 NEK3P51956 506 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 PTPN5P54829 565 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 ITIH4Q14624 930 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 KAT2AQ92830 837 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 MRPL45Q9BRJ2 306 aaKnown RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 PDCD10Q9BUL8 212 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 FRMD8Q9BZ67 464 aaPredicted RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 EPB41L1Q9H4G0 881 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 MCUBQ9NWR8 336 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 DDX20Q9UHI6 824 aaKnown RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 CNOT6Q9ULM6 557 aaKnown RBP13.88□□□□□ -0.19
VAPA-202ENST00000400000 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
VAPA-202ENST00000400000 FAM237BA0A1B0GVD1 139 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 CNTFP26441 200 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 TLX1P31314 330 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 MAD2L1Q13257 205 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 C12orf50Q8NA57 414 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 ACTRT1Q8TDG2 376 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 VPS35Q96QK1 796 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 BDH2Q9BUT1 245 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 GNPTGQ9UJJ9 305 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 ACKR2O00590 384 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 LIN7AO14910 233 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 GRIA3P42263 894 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 CIR1Q86X95 450 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 ZNF75CPQ92670 426 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 PCDHA11Q9Y5I1 949 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 INO80Q9ULG1 1556 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 NCAM2O15394 837 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 SLC28A2O43868 658 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 SPIBQ01892 262 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 TRAF3Q13114 568 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 RFX4Q33E94 735 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 CENPIQ92674 756 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 PDLIM2Q96JY6 352 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 KCNS3Q9BQ31 491 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 MCMBPQ9BTE3 642 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 EPB41L4BQ9H329 900 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 REEP1Q9H902 201 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 EHD3Q9NZN3 535 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 SIRPGQ9P1W8 387 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 MAGEB16A2A368 324 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 ENPP3O14638 875 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 TRUB2O95900 331 aaKnown RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 ADRA1DP25100 572 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 GPR158Q5T848 1215 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 HIPK1Q86Z02 1210 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 DEFB119Q8N690 84 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 C18orf25Q96B23 403 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 CCDC189A1A4V9 331 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 SEPT4O43236 478 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 ATP6V1G2O95670 118 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 TOP3BO95985 862 aaKnown RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 KDELR1P24390 212 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 SLC25A3Q00325 362 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 IQSEC1Q6DN90 963 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 EIF3MQ7L2H7 374 aaKnown RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 DAW1Q8N136 415 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 LNX2Q8N448 690 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 FAM98AQ8NCA5 519 aaKnown RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 MECRQ9BV79 373 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 DNAJC18Q9H819 358 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 PSMD13Q9UNM6 376 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 CENPXA8MT69 81 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 ANXA5P08758 320 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 FAM58BPP0C7Q3 252 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 DDR1Q08345 913 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 SUZ12Q15022 739 aaKnown RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 RGMBQ6NW40 437 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 PTF1AQ7RTS3 328 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 RORBQ92753 470 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 C19orf60Q96EN9 201 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 APOPT1Q96IL0 206 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 ARIH1Q9Y4X5 557 aaPredicted RBP13.87□□□□□ -0.19
VAPA-202ENST00000400000 U3KQV3 271 aa13.87□□□□□ -0.19
VAPA-202ENST00000400000 ADRB2P07550 413 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 OR1D2P34982 312 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 KPNB1Q14974 876 aaKnown RBP13.86□□□□□ -0.19
VAPA-202ENST00000400000 PSMD5Q16401 504 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 MPPE1Q53F39 396 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 APOBEC3HQ6NTF7 200 aaKnown RBP13.86□□□□□ -0.19
VAPA-202ENST00000400000 PRR23BQ6ZRT6 265 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 PTPN18Q99952 460 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 GINS4Q9BRT9 223 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 CDADC1Q9BWV3 514 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 BRINP2Q9C0B6 783 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 EGFL7Q9UHF1 273 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 ZNF222Q9UK12 451 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 SATB2Q9UPW6 733 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 TNS2Q63HR2 1409 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 MEGF6O75095 1541 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms