RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SQLEQ14534 574 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 MESDQ14696 234 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 NAB2Q15742 525 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PRICKLE4Q2TBC4 344 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 MDH1BQ5I0G3 518 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CEP85LQ5SZL2 805 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 KANK2Q63ZY3 851 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 NOTUMQ6P988 496 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 C1orf186Q6ZWK4 172 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCDC25Q86WR0 208 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ERO1BQ86YB8 467 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 WDTC1Q8N5D0 677 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF565Q8N9K5 539 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF610Q8N9Z0 462 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CRYGNQ8WXF5 182 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ALG14Q96F25 216 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PTCHD1Q96NR3 888 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 MRIQ9BWK5 157 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 TSGA10Q9BZW7 698 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ABCG8Q9H221 673 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PABPC3Q9H361 631 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 A1CFQ9NQ94 594 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 TM7SF3Q9NS93 570 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 LHX6Q9UPM6 363 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 GMEB1Q9Y692 573 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 MYH4Q9Y623 1939 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 MKI67P46013 3256 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 POTEB2H3BUK9 544 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PIP5K1BO14986 540 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CYP26A1O43174 497 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PHGDHO43175 533 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CALUO43852 315 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PSMD10O75832 226 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PTBP1P26599 531 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PTGER3P43115 390 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 FMO5P49326 533 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCT8P50990 548 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CLCNKAP51800 687 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 NKX3-2P78367 333 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 CDK17Q00537 523 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 MYL7Q01449 175 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 NPRL3Q12980 569 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 RCN2Q14257 317 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 DGKDQ16760 1214 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 SPOPLQ6IQ16 392 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 KLHL24Q6TFL4 600 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 SEZ6L2Q6UXD5 910 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 BTLAQ7Z6A9 289 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 DSG4Q86SJ6 1040 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 SCYL3Q8IZE3 742 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 GLIS1Q8NBF1 620 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 AGBL3Q8NEM8 1001 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PCDH19Q8TAB3 1148 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 SCAMP5Q8TAC9 235 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 AENQ8WTP8 325 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 PWWP2AQ96N64 755 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 C19orf43Q9BQ61 176 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZBED2Q9BTP6 218 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 MLXIPLQ9NP71 852 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 MTRF1LQ9UGC7 380 aaKnown RBP6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZHX2Q9Y6X8 837 aa6.33□□□□□ -1.4
TRAPPC13-202ENST00000399438 FOCADQ5VW36 1801 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 A0A096LPE4 126 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 A0A1W2PPZ6 126 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCDC154A6NI56 674 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ZNF233A6NK53 670 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ANKRD63C9JTQ0 380 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CD3EAPO15446 510 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 B4GALT4O60513 344 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 H2AFZP0C0S5 128 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 TCP1P17987 556 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 RPS12P25398 132 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 TTKP33981 857 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 HMGCS2P54868 508 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ACTR2P61160 394 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 MRPS9P82933 396 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 KCNAB2Q13303 367 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 MPP3Q13368 585 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 GPM6BQ13491 265 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 SPIDRQ14159 915 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 HP1BP3Q5SSJ5 553 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 DPY19L2P1Q6NXN4 242 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 H2AFVQ71UI9 128 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 SLC47A2Q86VL8 602 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CCDC110Q8TBZ0 833 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ALG3Q92685 438 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 PIWIL1Q96J94 861 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 INPP4AQ96PE3 977 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 UHRF1Q96T88 793 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 ELF4Q99607 663 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 NUP85Q9BW27 656 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 APOL6Q9BWW8 343 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 KLHL4Q9C0H6 718 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 SERHL2Q9H4I8 314 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CYP39A1Q9NYL5 469 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 RNF181Q9P0P0 153 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CTTNBP2NLQ9P2B4 639 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 KLHL9Q9P2J3 617 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 SNX24Q9Y343 169 aa6.32□□□□□ -1.4
TRAPPC13-202ENST00000399438 CNTNAP1P78357 1384 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms