RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 IPPQ9Y573 584 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 MYBPHLA2RUH7 354 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 TREHO43280 583 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 GCATO75600 419 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 WFS1O76024 890 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 AP2A1O95782 977 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 SOAT1P35610 550 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
SOCS6-201ENST00000397942 GAD2Q05329 585 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 MBTD1Q05BQ5 628 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 BLMHQ13867 455 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 LPCAT4Q643R3 524 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 OTOP3Q7RTS5 596 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 NKAPQ8N5F7 415 aaKnown RBP12.55□□□□□ -0.4
SOCS6-201ENST00000397942 DQX1Q8TE96 717 aaKnown RBP12.55□□□□□ -0.4
SOCS6-201ENST00000397942 PTCD3Q96EY7 689 aaKnown RBP12.55□□□□□ -0.4
SOCS6-201ENST00000397942 FETUBQ9UGM5 382 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 TCRBV7S3A2A0A539 114 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 TRIM38O00635 465 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 TSPAN1O60635 241 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 TBX10O75333 385 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 CPSF4O95639 269 aaKnown RBP12.55□□□□□ -0.4
SOCS6-201ENST00000397942 LRG1P02750 347 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 URODP06132 367 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 HSPA14Q0VDF9 509 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 ILF2Q12905 390 aaKnown RBP12.55□□□□□ -0.4
SOCS6-201ENST00000397942 TUSC3Q13454 348 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 HIST2H2ACQ16777 129 aaPredicted RBP12.55□□□□□ -0.4
SOCS6-201ENST00000397942 ZNF284Q2VY69 593 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 STXBP5Q5T5C0 1151 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 HIST2H2AA3Q6FI13 130 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 CCDC185Q8N715 623 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 CATSPERZQ9NTU4 200 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 EGFL7Q9UHF1 273 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 DERAQ9Y315 318 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 AP4B1Q9Y6B7 739 aa12.55□□□□□ -0.4
SOCS6-201ENST00000397942 A0A087X1B8 175 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 RGS5O15539 181 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 NRP2O60462 931 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 PAGE1O75459 146 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 USP2O75604 605 aaPredicted RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 LMO2P25791 158 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 SERPINB1P30740 379 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 TAS2R39P59534 338 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 TRIM60Q495X7 471 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 PLEKHA8Q96JA3 519 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 FIZ1Q96SL8 496 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 CDH19Q9H159 772 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 KLQ9UEF7 1012 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 SLC12A4Q9UP95 1085 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 MYH8P13535 1937 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 C1orf232A0A0U1RR37 186 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 YJEFN3A6XGL0 299 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 TLR5O60602 858 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 MT-CYBP00156 380 aaPredicted RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 NOVP48745 357 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 NDUFV1P49821 464 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 MAP2K5Q13163 448 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 DDR2Q16832 855 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 TIGD2Q4W5G0 525 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 BRMS1LQ5PSV4 323 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 ATAD1Q8NBU5 361 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 DDX1Q92499 740 aaKnown RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 TRIM45Q9H8W5 580 aaPredicted RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 ZNF358Q9NW07 568 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 PWP1Q13610 501 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 USP50Q70EL3 339 aaPredicted RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 NIPA2Q8N8Q9 360 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 ITFG1Q8TB96 612 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 NXNL1Q96CM4 212 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 C6orf203Q9P0P8 240 aaPredicted RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 MCM8Q9UJA3 840 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 ANAPC2Q9UJX6 822 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 ATP11BQ9Y2G3 1177 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 WASF2Q9Y6W5 498 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 A8MX80 341 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 AZIN1O14977 448 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 MSI1O43347 362 aaKnown RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 BCL10O95999 233 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 ETS2P15036 469 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 BBS7Q8IWZ6 715 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 TSPAN14Q8NG11 270 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 RDH11Q8TC12 318 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 SPPL2AQ8TCT8 520 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 CASP10Q92851 521 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 QKIQ96PU8 341 aaKnown RBP eCLIP12.54□□□□□ -0.41e-7■■■■■ 30.7
SOCS6-201ENST00000397942 SLC9A7Q96T83 725 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 OPTCQ9UBM4 332 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 SMIM35A0A1B0GVV1 85 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 MANSC4A6NHS7 340 aaPredicted RBP12.54□□□□□ -0.4
SOCS6-201ENST00000397942 S100A3P33764 101 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 NR1H2P55055 460 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 PGS1Q32NB8 556 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 NUDT18Q6ZVK8 323 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 RAB42Q8N4Z0 105 aa12.54□□□□□ -0.4
SOCS6-201ENST00000397942 MCOLN3Q8TDD5 553 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms