RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 FETUBQ9UGM5 382 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 TTC3P53804 2025 aa5.09□□□□□ -1.59
SSR1-202ENST00000397511 SMIM28A0A1B0GU29 152 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 KRBA1A5PL33 1030 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CARNS1A5YM72 827 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TTC34A8MYJ7 566 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 GIPC1O14908 333 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TREHO43280 583 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 KLHL2O95198 593 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CHEK2O96017 543 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 C8BP07358 591 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CTSHP09668 335 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 USP17L7P0C7H9 530 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TCN1P20061 433 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 PRKCHP24723 683 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 RCVRNP35243 200 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 HNRNPFP52597 415 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 WASHC5Q12768 1159 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PDK1Q15118 436 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CYP2A13Q16696 494 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ZBED5Q49AG3 693 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ZNF484Q5JVG2 852 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 WSCD1Q658N2 575 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TWF2Q6IBS0 349 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 KRT80Q6KB66 452 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 MAMDC4Q6UXC1 1216 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 STRA8Q7Z7C7 330 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 HPS6Q86YV9 775 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CDKL3Q8IVW4 592 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 PHTF2Q8N3S3 785 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 FBXW8Q8N3Y1 598 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SNX31Q8N9S9 440 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TERB1Q8NA31 727 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ARRDC4Q8NCT1 418 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TTC16Q8NEE8 873 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PDZD8Q8NEN9 1154 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 BEST2Q8NFU1 509 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 OR7G1Q8NGA0 311 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TBC1D15Q8TC07 691 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PIWIL2Q8TC59 973 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 KBTBD7Q8WVZ9 684 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 HPS1Q92902 700 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 LPPQ93052 612 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ATP2A3Q93084 1043 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 RNF34Q969K3 372 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 C12orf43Q96C57 262 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 C7orf26Q96N11 449 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ZNF670Q9BS34 389 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SLC4A5Q9BY07 1137 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 GCOM2Q9BZD3 368 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 WDR55Q9H6Y2 383 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 CAAP1Q9H8G2 361 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 LRRC4Q9HBW1 653 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 BCAP29Q9UHQ4 241 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 EMCNQ9ULC0 261 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 APOBEC2Q9Y235 224 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 ERGIC3Q9Y282 383 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 B3GNT3Q9Y2A9 372 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 MYRFQ9Y2G1 1151 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 IFT52Q9Y366 437 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 AP4S1Q9Y587 144 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PCDHA11Q9Y5I1 949 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SIP14410 1827 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TRIP12Q14669 1992 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 SDR42E2A6NKP2 422 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 GOLGA8CPA6NN73 597 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 YJEFN3A6XGL0 299 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 I6L893 689 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 PDHXO00330 501 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 EEF2KO00418 725 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 NRP1O14786 923 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CFLARO15519 480 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PHGDHO43175 533 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 FOXD2O60548 495 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 HUS1O60921 280 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 BMP10O95393 424 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SNAI1O95863 264 aaPredicted RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 CHRNGP07510 517 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CHRNB1P11230 501 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ARSAP15289 507 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SLC26A2P50443 739 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CD300CQ08708 224 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 BST2Q10589 180 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 ADGRE1Q14246 886 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 DPYSL2Q16555 572 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 PKDCCQ504Y2 493 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TEX44Q53QW1 395 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ZFP1Q6P2D0 407 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SLC27A1Q6PCB7 646 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 RPS27LQ71UM5 84 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 GPRIN1Q7Z2K8 1008 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ITIH5Q86UX2 942 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 NPAS4Q8IUM7 802 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 SIX6OS1Q8N1H7 587 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 ZNF781Q8N8C0 355 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 HM13Q8TCT9 377 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 RNF139Q8WU17 664 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 TRUB1Q8WWH5 349 aaKnown RBP5.08□□□□□ -1.6
SSR1-202ENST00000397511 ARNTL2Q8WYA1 636 aa5.08□□□□□ -1.6
SSR1-202ENST00000397511 CDKL2Q92772 493 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms