RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ILF2Q12905 390 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 NAB1Q13506 487 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 MSS51Q4VC12 460 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 PCID2Q5JVF3 399 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 STEAP4Q687X5 459 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 MBLAC2Q68D91 279 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 GRAMD4Q6IC98 578 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 GSDMBQ8TAX9 411 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 UCMAQ8WVF2 138 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 C9orf72Q96LT7 481 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 CYTH2Q99418 400 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 SH3GL2Q99962 352 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 C19orf43Q9BQ61 176 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 EBF3Q9H4W6 596 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 UBE2ZQ9H832 354 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 VPS37BQ9H9H4 285 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 SLC24A2Q9UI40 661 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 CLEC4EQ9ULY5 219 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 NFS1Q9Y697 457 aa19.25■□□□□ 0.67
TSPAN4-204ENST00000397404 GOLGA8KD6RF30 607 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 ATP9BO43861 1147 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 TULP3O75386 442 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 PMPCBO75439 489 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 USP1O94782 785 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 NDST3O95803 873 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 DLDP09622 509 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 SCNN1BP51168 640 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 MAXP61244 160 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 DSC2Q02487 901 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 SLC1A5Q15758 541 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 KCTD19Q17RG1 926 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 ITPRIPL2Q3MIP1 535 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 SPANXN3Q5MJ09 141 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 SRLQ86TD4 932 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 ADIPOR2Q86V24 386 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 TDRPQ86YL5 185 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 OR2AP1Q8NGE2 309 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 OR52K1Q8NGK4 314 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 LRIG1Q96JA1 1093 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 FICDQ9BVA6 458 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 CPEB1Q9BZB8 566 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 LHX3Q9UBR4 397 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 RIMKLBQ9ULI2 386 aa19.24■□□□□ 0.67
TSPAN4-204ENST00000397404 HEATR9A2RTY3 570 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 CDH16O75309 829 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 PAPSS2O95340 614 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 SRCP12931 536 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 PAMP19021 973 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 ADRA1DP25100 572 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 NFKBIAP25963 317 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 ST8SIA6P61647 398 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 PDE1BQ01064 536 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 HTR4Q13639 388 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 CASC4Q6P4E1 433 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 NCEH1Q6PIU2 408 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 TMEM135Q86UB9 458 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 NDUFAF2Q8N183 169 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 PPHLN1Q8NEY8 458 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 CDKL2Q92772 493 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 ASIC4Q96FT7 647 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 MSANTD3Q96H12 275 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 PWWP2AQ96N64 755 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 KIFC1Q9BW19 673 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 ACSS3Q9H6R3 686 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 ATP13A3Q9H7F0 1226 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 NOD2Q9HC29 1040 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 HPS4Q9NQG7 708 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 UBP1Q9NZI7 540 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 HACD3Q9P035 362 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 SOX13Q9UN79 622 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 CHMP2BQ9UQN3 213 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 MAD1L1Q9Y6D9 718 aa19.23■□□□□ 0.67
TSPAN4-204ENST00000397404 MUSKO15146 869 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 AVILO75366 819 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 ALDH1A2O94788 518 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 RECQLP46063 649 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 SESN2P58004 480 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 FASTKD3Q14CZ7 662 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 TRIM68Q6AZZ1 485 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 PARM1Q6UWI2 310 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 FGF14Q92915 247 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 PGM2Q96G03 612 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 TDRD1Q9BXT4 1180 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 PRKAG3Q9UGI9 489 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 PLA2G4CQ9UP65 541 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 ERVW-1Q9UQF0 538 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 EXOC1LA0A1B0GW35 172 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 RASGRF2O14827 1237 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 POP4O95707 220 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 ARSAP15289 507 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 PRKCHP24723 683 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 MGAT1P26572 445 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 SERPINA4P29622 427 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 GDI1P31150 447 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 GRIA1P42261 906 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 CEP85LQ5SZL2 805 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 SYCP2LQ5T4T6 812 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 DENND5AQ6IQ26 1287 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 C22orf39Q6P5X5 142 aa19.22■□□□□ 0.67
TSPAN4-204ENST00000397404 LINGO4Q6UY18 593 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms