RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 C1QTNF7Q9BXJ2 289 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 ANAPC7Q9UJX3 599 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 NEUROG3Q9Y4Z2 214 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 HS3ST3A1Q9Y663 406 aa14.15□□□□□ -0.14
SEC13-204ENST00000397099 KMT2BQ9UMN6 2715 aaPredicted RBP14.15□□□□□ -0.14
SEC13-204ENST00000397099 MAP1BP46821 2468 aaKnown RBP14.15□□□□□ -0.14
SEC13-204ENST00000397099 COL5A1P20908 1838 aaPredicted RBP14.14□□□□□ -0.15
SEC13-204ENST00000397099 C16orf96A6NNT2 1141 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 H0Y8X5 98 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 PLK4O00444 970 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 NEMP1O14524 444 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 TOR1BO14657 336 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 CBFA2T3O75081 653 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 CDK4P11802 303 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 ERCC2P18074 760 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 MAT2AP31153 395 aaKnown RBP14.14□□□□□ -0.15
SEC13-204ENST00000397099 CSNK1DP48730 415 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 RENBPP51606 427 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 IL10RBQ08334 325 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 NSUN2Q08J23 767 aaKnown RBP eCLIP14.14□□□□□ -0.15
SEC13-204ENST00000397099 SGCGQ13326 291 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 ZNF284Q2VY69 593 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 TMEM259Q4ZIN3 620 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 AFMIDQ63HM1 303 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 CYP4V2Q6ZWL3 525 aaPredicted RBP14.14□□□□□ -0.15
SEC13-204ENST00000397099 CNGA4Q8IV77 575 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 VSTM4Q8IW00 320 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 TMEM145Q8NBT3 493 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 RHBDD1Q8TEB9 315 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 IFT43Q96FT9 208 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 KLHDC7BQ96G42 594 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 ZNF641Q96N77 438 aaPredicted RBP14.14□□□□□ -0.15
SEC13-204ENST00000397099 LENG8Q96PV6 779 aaPredicted RBP14.14□□□□□ -0.15
SEC13-204ENST00000397099 TUBGCP5Q96RT8 1024 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 PEBP4Q96S96 227 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 KCTD15Q96SI1 283 aaPredicted RBP14.14□□□□□ -0.15
SEC13-204ENST00000397099 HAUS2Q9NVX0 235 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 FADS3Q9Y5Q0 445 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 CACNA1BQ00975 2339 aa14.14□□□□□ -0.15
SEC13-204ENST00000397099 KCNK3O14649 394 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 PALMO75781 387 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 WNT1P04628 370 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 UGT2B4P06133 528 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 FTH1P19P0C7X4 201 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 HSPA9P38646 679 aaKnown RBP14.13□□□□□ -0.15
SEC13-204ENST00000397099 EIF4A3P38919 411 aaKnown RBP14.13□□□□□ -0.15
SEC13-204ENST00000397099 PAPOLAP51003 745 aaKnown RBP14.13□□□□□ -0.15
SEC13-204ENST00000397099 ELP6Q0PNE2 266 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 DPYSQ14117 519 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 BRAT1Q6PJG6 821 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 SARM1Q6SZW1 724 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 TMCO3Q6UWJ1 677 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 PARS2Q7L3T8 475 aaKnown RBP14.13□□□□□ -0.15
SEC13-204ENST00000397099 MAP7D3Q8IWC1 876 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 BBS5Q8N3I7 341 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 PNPLA1Q8N8W4 532 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 DENND6BQ8NEG7 585 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 BAHD1Q8TBE0 780 aaPredicted RBP14.13□□□□□ -0.15
SEC13-204ENST00000397099 ZNF564Q8TBZ8 553 aaPredicted RBP14.13□□□□□ -0.15
SEC13-204ENST00000397099 SLC17A9Q9BYT1 436 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 TRIM7Q9C029 511 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 PDFQ9HBH1 243 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.13□□□□□ -0.15
SEC13-204ENST00000397099 GPATCH2LQ9NWQ4 482 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 CWC15Q9P013 229 aaKnown RBP14.13□□□□□ -0.15
SEC13-204ENST00000397099 ZMIZ1Q9ULJ6 1067 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 MSRB2Q9Y3D2 182 aa14.13□□□□□ -0.15
SEC13-204ENST00000397099 DOCK9Q9BZ29 2069 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 A0A1W2PQ67 120 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 TMEM8BA6NDV4 472 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 GOLGA8CPA6NN73 597 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 A6NNZ2 444 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 RIOK3O14730 519 aaKnown RBP14.12□□□□□ -0.15
SEC13-204ENST00000397099 SLC31A1O15431 190 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 TNFSF14O43557 240 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 AKR1B10O60218 316 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 ITGAVP06756 1048 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 KRT7P08729 469 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 XPAP23025 273 aaPredicted RBP14.12□□□□□ -0.15
SEC13-204ENST00000397099 NFKBIAP25963 317 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 POLR2LP62875 67 aaKnown RBP14.12□□□□□ -0.15
SEC13-204ENST00000397099 IL9RQ01113 521 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 CA9Q16790 459 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 RALGPS1Q5JS13 557 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 CFAP58Q5T655 872 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 POLNQ7Z5Q5 900 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 ABI3BPQ7Z7G0 1075 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 TTC7BQ86TV6 843 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 NSMCE1Q8WV22 266 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 ZCCHC14Q8WYQ9 949 aaKnown RBP14.12□□□□□ -0.15
SEC13-204ENST00000397099 GATA6Q92908 595 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 CCDC42Q96M95 316 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 KLHL32Q96NJ5 620 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 C1QTNF2Q9BXJ5 285 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 SLC39A8Q9C0K1 460 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 ATP13A3Q9H7F0 1226 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 SP110Q9HB58 689 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 ABHD10Q9NUJ1 306 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 CTTNBP2NLQ9P2B4 639 aa14.12□□□□□ -0.15
SEC13-204ENST00000397099 SEPT3Q9UH03 358 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms