RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PTPN9P43378 593 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 NSUN2Q08J23 767 aaKnown RBP eCLIP24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 GRM3Q14832 879 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 KIZQ2M2Z5 673 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 GPR107Q5VW38 600 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 KCNMB4Q86W47 210 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 PNPLA1Q8N8W4 532 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 VPS39Q96JC1 886 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 PPP1R10Q96QC0 940 aaKnown RBP24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 SMARCAD1Q9H4L7 1026 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 FZD10Q9ULW2 581 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 CD247P20963 164 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 TKTP29401 623 aaKnown RBP24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 PRKAA1Q13131 559 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 FGD3Q5JSP0 725 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 SYPL2Q5VXT5 272 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 DCLRE1AQ6PJP8 1040 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 SLC26A9Q7LBE3 791 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 PLPPR4Q7Z2D5 763 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 C11orf84Q9BUA3 381 aaPredicted RBP24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 NPLQ9BXD5 320 aaPredicted RBP24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 TXNRD2Q9NNW7 524 aa24.26■■□□□ 1.47
CSNK1E-203ENST00000396832 M0QYT0 321 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 TSPAN1O60635 241 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 TIPRLO75663 272 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 VGLL4Q14135 290 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 ADAMTS16Q8TE57 1224 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 USP33Q8TEY7 942 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 EIF2AQ9BY44 585 aaKnown RBP24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 VTI1BQ9UEU0 232 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 CNOT6Q9ULM6 557 aaKnown RBP24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 ZCWPW2A0A1B0GU75 182 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 ZBTB24O43167 697 aaPredicted RBP24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 SEC24DO94855 1032 aaPredicted RBP24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 NMBRP28336 390 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 PRKCQQ04759 706 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 LIPMQ5VYY2 423 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 PPP4R4Q6NUP7 873 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 HFE2Q6ZVN8 426 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 RIOX2Q8IUF8 465 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 NFKBIEO00221 500 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 EPHX2P34913 555 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 PMS2P3Q13401 168 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 KDELC2Q7Z4H8 507 aa24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 UTP6Q9NYH9 597 aaKnown RBP24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 PTBP2Q9UKA9 531 aaKnown RBP24.25■■□□□ 1.47
CSNK1E-203ENST00000396832 SOBPA7XYQ1 873 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 AKAP10O43572 662 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 BEST1O76090 585 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 INHBBP09529 407 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 HK2P52789 917 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 BST2Q10589 180 aaKnown RBP24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 BNIP3Q12983 259 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 CENPIQ92674 756 aaPredicted RBP24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 TOP1MTQ969P6 601 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 UHRF1Q96T88 793 aaPredicted RBP24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 BRD8Q9H0E9 1235 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 UNC93B1Q9H1C4 597 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 LRRC40Q9H9A6 602 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 RMI1Q9H9A7 625 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 MRPL40Q9NQ50 206 aaKnown RBP24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 TRNAU1APQ9NX07 287 aaKnown RBP24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 BFARQ9NZS9 450 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 KIAA1257Q9ULG3 409 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 BRCA2P51587 3418 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 TCRBV3S1A0A5B6 114 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 PRORSD1PA6NEY8 169 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 EEF2KO00418 725 aaKnown RBP24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 TOMM70O94826 608 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 PSMD8P48556 350 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 AARS2Q5JTZ9 985 aaKnown RBP24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 SPANXN3Q5MJ09 141 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 TMEM53Q6P2H8 277 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 LAYNQ6UX15 382 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 SLC41A1Q8IVJ1 513 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 SLC7A14Q8TBB6 771 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 EFHD1Q9BUP0 239 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 FAM49AQ9H0Q0 323 aaPredicted RBP24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 FADS3Q9Y5Q0 445 aa24.24■■□□□ 1.47
CSNK1E-203ENST00000396832 HEATR9A2RTY3 570 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 SLCO1B7G3V0H7 640 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 PTPN3P26045 913 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 USP10Q14694 798 aaKnown RBP24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 ZNF280DQ6N043 979 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 SMOXQ9NWM0 555 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 CACNG4Q9UBN1 327 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 NEMP2A6NFY4 417 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 ZYG11AQ6WRX3 759 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 TMEM26Q6ZUK4 368 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 PIGVQ9NUD9 493 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 ERAP1Q9NZ08 941 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 RUVBL2Q9Y230 463 aaKnown RBP24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 TRIM17Q9Y577 477 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 TLL2Q9Y6L7 1015 aa24.23■■□□□ 1.47
CSNK1E-203ENST00000396832 SAC3D1A6NKF1 404 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 J3QRK9 145 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 TRIM24O15164 1050 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 SBK3P0C264 359 aa24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 HNRNPLP14866 589 aaKnown RBP eCLIP24.22■■□□□ 1.47
CSNK1E-203ENST00000396832 BMXP51813 675 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms