RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 UPF3AQ9H1J1 476 aaKnown RBP9.95□□□□□ -0.82
TRIM39-203ENST00000396547 GIMAP2Q9UG22 337 aa9.95□□□□□ -0.82
TRIM39-203ENST00000396547 TSC22D4Q9Y3Q8 395 aa9.95□□□□□ -0.82
TRIM39-203ENST00000396547 TMEM221A6NGB7 291 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 DDHD2O94830 711 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 ZFXP17010 805 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-203ENST00000396547 LRPAP1P30533 357 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 TXNL4AP83876 142 aaKnown RBP9.94□□□□□ -0.82
TRIM39-203ENST00000396547 CAPRIN1Q14444 709 aaKnown RBP9.94□□□□□ -0.82
TRIM39-203ENST00000396547 CYP2A13Q16696 494 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 KIF19Q2TAC6 998 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 REP15Q6BDI9 236 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 DENND6AQ8IWF6 608 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 ZC3H7AQ8IWR0 971 aaKnown RBP9.94□□□□□ -0.82
TRIM39-203ENST00000396547 LZTR1Q8N653 840 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 ZNF280CQ8ND82 737 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 ASB9Q96DX5 294 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 MS4A4AQ96JQ5 239 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 DPEP3Q9H4B8 488 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 IGSF9Q9P2J2 1179 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 TRIP11Q15643 1979 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 CXCL11O14625 94 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 UBDO15205 165 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 B4GALT4O60513 344 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 CBFA2T3O75081 653 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 GABBR2O75899 941 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 MPOP05164 745 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 NCAM1P13591 858 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 UBA1P22314 1058 aaKnown RBP9.94□□□□□ -0.82
TRIM39-203ENST00000396547 YWHAQP27348 245 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 SULT1E1P49888 294 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 MPP1Q00013 466 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 ZBED5Q49AG3 693 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 SPANXN3Q5MJ09 141 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 CLEC6AQ6EIG7 209 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 GALNT18Q6P9A2 607 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 FAM35AQ86V20 835 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 ERO1BQ86YB8 467 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 LSMEM2Q8N112 164 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 BPIFB6Q8NFQ5 453 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 MAGEE2Q8TD90 523 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-203ENST00000396547 KIF12Q96FN5 646 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 TSPAN18Q96SJ8 248 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 POMKQ9H5K3 350 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 ABT1Q9ULW3 272 aaKnown RBP9.94□□□□□ -0.82
TRIM39-203ENST00000396547 DGKBQ9Y6T7 804 aa9.94□□□□□ -0.82
TRIM39-203ENST00000396547 H3BMQ9 156 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 PPEF2O14830 753 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ADAM23O75077 832 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 IQCF3P0C7M6 154 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 GJA9P57773 515 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 STX5Q13190 355 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 DPYSQ14117 519 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CSHL1Q14406 222 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 POU6F1Q14863 301 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 FUT11Q495W5 492 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 OTUD3Q5T2D3 398 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CNSTQ6PJW8 725 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 LCLAT1Q6UWP7 414 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 C4orf22Q6V702 233 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 DCDC5Q6ZRR9 648 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 KCTD8Q6ZWB6 473 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 LYSMD3Q7Z3D4 306 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 COG8Q96MW5 612 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 FTHL17Q9BXU8 183 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 MUC3BQ9H195 1237 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CXCL16Q9H2A7 254 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ATXN3LQ9H3M9 355 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 DUS2Q9NX74 493 aaKnown RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 WARS2Q9UGM6 360 aaKnown RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CROTQ9UKG9 612 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CORINQ9Y5Q5 1042 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 RLFQ13129 1914 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 NR5A2O00482 541 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ZBTB24O43167 697 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 MAFO75444 373 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 TADA2AO75478 443 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SRP72O76094 671 aaKnown RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 HSPA8P11142 646 aaKnown RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 NR2C2P49116 596 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 NUMBP49757 651 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CLCN2P51788 898 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 BMXP51813 675 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 RAB39AQ14964 217 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 TMEM132DQ14C87 1099 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 CARTPTQ16568 116 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 IER5Q5VY09 327 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 EFCAB12Q6NXP0 572 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ZYG11AQ6WRX3 759 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 PIGZQ86VD9 579 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 IFNLR1Q8IU57 520 aaPredicted RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SLC15A4Q8N697 577 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 SHCBP1Q8NEM2 672 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 PDZD8Q8NEN9 1154 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ELMO2Q96JJ3 720 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 BIRC8Q96P09 236 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 HIPK3Q9H422 1215 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 RPF2Q9H7B2 306 aaKnown RBP9.93□□□□□ -0.82
TRIM39-203ENST00000396547 ZFYVE28Q9HCC9 887 aa9.93□□□□□ -0.82
TRIM39-203ENST00000396547 DPP3Q9NY33 737 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms