RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ZDHHC6Q9H6R6 413 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 KLF15Q9UIH9 416 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 PCDHGA7Q9Y5G6 932 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 TRPM6Q9BX84 2022 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 ZSCAN5CA6NGD5 496 aaPredicted RBP17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 TMEM110-MUSTN1A8MSY1 372 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 RNF103O00237 685 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 BIN1O00499 593 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 MUSKO15146 869 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 TNFSF15O95150 251 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 GSRP00390 522 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 MAPKAPK2P49137 400 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 INHBCP55103 352 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 RAD51Q06609 339 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 LY6DQ14210 128 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 PRRT3Q5FWE3 981 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 BNIPLQ7Z465 357 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 CREBRFQ8IUR6 639 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 PHACTR4Q8IZ21 702 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 OR2AP1Q8NGE2 309 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 CCNL2Q96S94 520 aaPredicted RBP17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 MAGEH1Q9H213 219 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 ATXN7L1Q9ULK2 861 aaPredicted RBP17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 PADI4Q9UM07 663 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 DOCK9Q9BZ29 2069 aa17.78■□□□□ 0.44
EXOSC3-202ENST00000396521 PIEZO2Q9H5I5 2752 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 MYO18BQ8IUG5 2567 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 A0A1W2PNU3 283 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 AREL1O15033 823 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 SPINT1O43278 529 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 ALPIP09923 528 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 TFE3P19532 575 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 PEX5P50542 639 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 ADKP55263 362 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 PPARDQ03181 441 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 ELOCQ15369 112 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 FAXCQ5TGI0 409 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 MACC1Q6ZN28 852 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 SLC35F3Q8IY50 421 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 RYBPQ8N488 228 aaPredicted RBP17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 CASKIN2Q8WXE0 1202 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 STRADBQ9C0K7 418 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 ACSL6Q9UKU0 697 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 FCF1Q9Y324 198 aaKnown RBP17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 SNX10Q9Y5X0 201 aa17.77■□□□□ 0.44
EXOSC3-202ENST00000396521 NTN3O00634 580 aaPredicted RBP17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 YY2O15391 372 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 TM7SF2O76062 418 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 CLN3Q13286 438 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 MYLK3Q32MK0 819 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 ARTNQ5T4W7 220 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 TTC7BQ86TV6 843 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 XYLT1Q86Y38 959 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 DRC7Q8IY82 874 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 ARL10Q8N8L6 244 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 ARHGEF2Q92974 986 aaKnown RBP17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 CCDC3Q9BQI4 270 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 LRRC61Q9BV99 259 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 TM6SF2Q9BZW4 377 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 SEMA4CQ9C0C4 833 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 OR12D3Q9UGF7 316 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 TMEM59LQ9UK28 342 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 DOLKQ9UPQ8 538 aa17.76■□□□□ 0.43
EXOSC3-202ENST00000396521 KRIT1O00522 736 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 PLD2O14939 933 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 GCATO75600 419 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 WISP1O95388 367 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 GJB6O95452 261 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 SFTPCP11686 197 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 CYP11B1P15538 503 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 RHOQP17081 205 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 FLT3P36888 993 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 ABL2P42684 1182 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 MTIF2P46199 727 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 PERM1Q5SV97 790 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 GDPD4Q6W3E5 623 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 FAM131BQ86XD5 332 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 FAM114A1Q8IWE2 563 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 ATL2Q8NHH9 583 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 HCAR2Q8TDS4 363 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 TMEM159Q96B96 161 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 TMEM74Q96NL1 305 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 SIX2Q9NPC8 291 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 DKK3Q9UBP4 350 aa17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 TDRD6O60522 2096 aaKnown RBP17.75■□□□□ 0.43
EXOSC3-202ENST00000396521 SLC28A2O43868 658 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 RAMP2O60895 175 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 CD160O95971 181 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 ITGB2P05107 769 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 TSHRP16473 764 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 HTR1BP28222 390 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 ADRA1BP35368 520 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 EIF4A3P38919 411 aaKnown RBP17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 APBA1Q02410 837 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 BECN1Q14457 450 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 MAN2A1Q16706 1144 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 TPRG1LQ5T0D9 272 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 FOXR1Q6PIV2 292 aa17.74■□□□□ 0.43
EXOSC3-202ENST00000396521 FBXO39Q8N4B4 442 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms