RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TMEM63AO94886 807 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 RBP3P10745 1247 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 RHOQP17081 205 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 GARSP41250 739 aaKnown RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 MRPL19P49406 292 aaKnown RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 PRKAA2P54646 552 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 AQP4P55087 323 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 GDF10P55107 478 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 MLLT6P55198 1093 aaPredicted RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 OSTNP61366 133 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 ADIGQ0VDE8 80 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 FAAP100Q0VG06 881 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 RAB33AQ14088 237 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 BCL2A1Q16548 175 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 CCDC92Q53HC0 331 aaPredicted RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 MPP7Q5T2T1 576 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 C16orf87Q6PH81 154 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 CCDC80Q76M96 950 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 PLPP6Q8IY26 295 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 C4orf33Q8N1A6 199 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 CHCHD4Q8N4Q1 142 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 CCDC185Q8N715 623 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 BANPQ8N9N5 519 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 RNF169Q8NCN4 708 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 RBM15BQ8NDT2 890 aaKnown RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 FBXO27Q8NI29 283 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 PHOSPHO2Q8TCD6 241 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 ZNF296Q8WUU4 475 aaPredicted RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 HTR3CQ8WXA8 447 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 ARNTL2Q8WYA1 636 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 CLIP3Q96DZ5 547 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 OXNAD1Q96HP4 312 aaPredicted RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 SCYL1Q96KG9 808 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 ZFRQ96KR1 1074 aaKnown RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 C9orf72Q96LT7 481 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 CYTH2Q99418 400 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 EBNA1BP2Q99848 306 aaKnown RBP5.44□□□□□ -1.54
VPS41-203ENST00000395969 KLHL4Q9C0H6 718 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.44□□□□□ -1.542e-6■■■■■ 93.9
VPS41-203ENST00000395969 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS41-203ENST00000395969 VPS45Q9NRW7 570 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 MRGBPQ9NV56 204 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 INPP5FQ9Y2H2 1132 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 HES2Q9Y543 173 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 PLXNA2O75051 1894 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 MIA3Q5JRA6 1907 aa5.44□□□□□ -1.54
VPS41-203ENST00000395969 C15orf38-AP3S2A0A0A6YYH1 394 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 A0A0G2JND7 137 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 A0A1W2PPM1 405 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 C2orf72A6NCS6 295 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 FCHO1O14526 889 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 B4GALT3O60512 393 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 SERPINB7O75635 380 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 CIB2O75838 187 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 PGM3O95394 542 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 FGF19O95750 216 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 PCSK6P29122 969 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 SLC5A2P31639 672 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 ADCY8P40145 1251 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 CDH6P55285 790 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 NAA20P61599 178 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 RPL10AP62906 217 aaKnown RBP5.43□□□□□ -1.54
VPS41-203ENST00000395969 YWHAHQ04917 246 aaPredicted RBP5.43□□□□□ -1.54
VPS41-203ENST00000395969 BTKQ06187 659 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 OVGP1Q12889 678 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 CA9Q16790 459 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 NADK2Q4G0N4 442 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 DNAL1Q4LDG9 190 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 MDH1BQ5I0G3 518 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 RNF165Q6ZSG1 346 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 UTS2BQ765I0 119 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 GPRIN1Q7Z2K8 1008 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 ARPINQ7Z6K5 226 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 LINC00523Q86TU6 105 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 TTC7BQ86TV6 843 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 CROCCP3Q8IVE0 287 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 SCUBE3Q8IX30 993 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 RTL3Q8N8U3 475 aaKnown RBP5.43□□□□□ -1.54
VPS41-203ENST00000395969 GLIS1Q8NBF1 620 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 GPR150Q8NGU9 434 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 TEKT5Q96M29 485 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 ZFP42Q96MM3 310 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 TTC1Q99614 292 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 MRPS26Q9BYN8 205 aaKnown RBP5.43□□□□□ -1.54
VPS41-203ENST00000395969 MANSC1Q9H8J5 431 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 PFDN4Q9NQP4 134 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 STARD7Q9NQZ5 370 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 TRMT13Q9NUP7 481 aaKnown RBP5.43□□□□□ -1.54
VPS41-203ENST00000395969 TMLHEQ9NVH6 421 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS41-203ENST00000395969 AFF4Q9UHB7 1163 aaKnown RBP5.43□□□□□ -1.54
VPS41-203ENST00000395969 ADAMTS6Q9UKP5 1117 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 ABT1Q9ULW3 272 aaKnown RBP5.43□□□□□ -1.54
VPS41-203ENST00000395969 PCDHB5Q9Y5E4 795 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 SH3PXD2BA1X283 911 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 YJEFN3A6XGL0 299 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 MEIS3P2A8K0S8 358 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 B2RBV5 119 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 MATN3O15232 486 aa5.43□□□□□ -1.54
VPS41-203ENST00000395969 GREM1O60565 184 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms