RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MBTPS2O43462 519 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 SRCP12931 536 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 FOSL2P15408 326 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 SLC6A11P48066 632 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 NPY2RP49146 381 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 IFFO1Q0D2I5 559 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 HTR4Q13639 388 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 SLC14A2Q15849 920 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 TMEM215Q68D42 235 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 GRAMD4Q6IC98 578 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 LRIG3Q6UXM1 1119 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 RANBP10Q6VN20 620 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 TTC17Q96AE7 1141 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 STAMBPL1Q96FJ0 436 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 IFT43Q96FT9 208 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 CFAP36Q96G28 342 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 EBNA1BP2Q99848 306 aaKnown RBP20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 TM6SF2Q9BZW4 377 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 SYBUQ9NX95 663 aa20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 ZC3H7BQ9UGR2 993 aaKnown RBP20.67■□□□□ 0.9
VCPKMT-202ENST00000395860 TICRRQ7Z2Z1 1910 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 BRWD1Q9NSI6 2320 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 ABHD2P08910 425 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 SSTR1P30872 391 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 PHBP35232 272 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 EIF3BP55884 814 aaKnown RBP20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 CRADDP78560 199 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 SH2D3CQ8N5H7 860 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 SLC25A41Q8N5S1 370 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 SAMD15Q9P1V8 674 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 ERVW-1Q9UQF0 538 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 NFS1Q9Y697 457 aa20.66■□□□□ 0.9
VCPKMT-202ENST00000395860 A0A087WUV0 522 aaPredicted RBP20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 ANHXE9PGG2 379 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 SHBGP04278 402 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 TSHRP16473 764 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 TPH1P17752 444 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 GJA4P35212 333 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 GPX6P59796 221 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 CDK18Q07002 472 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 ACCSLQ4AC99 568 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 RALGPS1Q5JS13 557 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 ATXN7L2Q5T6C5 722 aaPredicted RBP20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 GPR153Q6NV75 609 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 C3orf62Q6ZUJ4 267 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 SRLQ86TD4 932 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 FEM1CQ96JP0 617 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 CIPCQ9C0C6 399 aa20.65■□□□□ 0.9
VCPKMT-202ENST00000395860 AGPSO00116 658 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 ATP9BO43861 1147 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 IGSF6O95976 241 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 KDSRQ06136 332 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 GPS2Q13227 327 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 ITPRIPL2Q3MIP1 535 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 CEP85LQ5SZL2 805 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 CERCAMQ5T4B2 595 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 DENND5AQ6IQ26 1287 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 NCEH1Q6PIU2 408 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 CCNJLQ8IV13 435 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 IL22Q9GZX6 179 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 BRD9Q9H8M2 597 aa20.64■□□□□ 0.9
VCPKMT-202ENST00000395860 LOC285095A0A1B0GVY8 99 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 SPAG6O75602 509 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 ASLP04424 464 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 ATP5BP06576 529 aaKnown RBP20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 NNMTP40261 264 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 CHRNA4P43681 627 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 SLC1A5Q15758 541 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 DGKKQ5KSL6 1271 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 C22orf39Q6P5X5 142 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 CYB5D2Q8WUJ1 264 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 ISG20Q96AZ6 181 aaKnown RBP20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 NSMCE3Q96MG7 304 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 GUCD1Q96NT3 240 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 NAT9Q9BTE0 207 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 CEP44Q9C0F1 390 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 TNKS2Q9H2K2 1166 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 ARNT2Q9HBZ2 717 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 SLCO3A1Q9UIG8 710 aa20.64■□□□□ 0.89
VCPKMT-202ENST00000395860 C2CD4DB7Z1M9 353 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 EPOP01588 193 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 PGAM1P18669 254 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 CSNK1DP48730 415 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 AP1S1P61966 158 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 SNRPD1P62314 119 aaKnown RBP20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 ZNF844Q08AG5 666 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 MTERF4Q7Z6M4 381 aaKnown RBP20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 RYBPQ8N488 228 aaPredicted RBP20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 DEFB123Q8N688 67 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 OR2AP1Q8NGE2 309 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 SORCS1Q8WY21 1168 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 HLA-CQ95604 372 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 CCDC77Q9BR77 488 aa20.63■□□□□ 0.89
VCPKMT-202ENST00000395860 OPA1O60313 960 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 ZNF821O75541 412 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 SRPRAP08240 638 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 GSTA2P09210 222 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 HLA-DPA1P20036 260 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 OPRD1P41143 372 aa20.62■□□□□ 0.89
VCPKMT-202ENST00000395860 DLG2Q15700 870 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms