RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 PALM2Q8IXS6 379 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 OR2AP1Q8NGE2 309 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 UBLCP1Q8WVY7 318 aaPredicted RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 TADA1Q96BN2 335 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 FEM1CQ96JP0 617 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 ZIM3Q96PE6 472 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 RPP25Q9BUL9 199 aaKnown RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 ADGRE3Q9BY15 652 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 C8orf33Q9H7E9 229 aaPredicted RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 SAMD15Q9P1V8 674 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 C5orf42Q9H799 3197 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 A0A1W2PQ67 120 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 ATP9BO43861 1147 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 TTC4O95801 387 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 MT-CO1P00395 513 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 CPP00450 1065 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 GSTA2P09210 222 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 GLULP15104 373 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 HLA-DPA1P20036 260 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 MAGEA3P43357 314 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 NUMBP49757 651 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 SKOR1P84550 965 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 CDK18Q07002 472 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 NIPAL4Q0D2K0 466 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 GPS2Q13227 327 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 AAK1Q2M2I8 961 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 SRLQ86TD4 932 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 CAND1Q86VP6 1230 aaKnown RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 ST13P5Q8NFI4 369 aaPredicted RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 RPL10LQ96L21 214 aaKnown RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 MRGPRX2Q96LB1 330 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 TUBGCP5Q96RT8 1024 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 RUFY1Q96T51 708 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 GORASP1Q9BQQ3 440 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 CCDC77Q9BR77 488 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 EPB41L4BQ9H329 900 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 CDC42EP4Q9H3Q1 356 aaKnown RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 ARNT2Q9HBZ2 717 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 NOD2Q9HC29 1040 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 MED4Q9NPJ6 270 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 CASS4Q9NQ75 786 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 LIMD1Q9UGP4 676 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 MUSKO15146 869 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 KAT7O95251 611 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 SYF2O95926 243 aaKnown RBP13.84□□□□□ -0.19
VAPB-202ENST00000395802 FGF1P05230 155 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 DLG2Q15700 870 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 GAB4Q2WGN9 574 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 FNBP1LQ5T0N5 605 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 C22orf39Q6P5X5 142 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 KDELC1Q6UW63 502 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 RANBP10Q6VN20 620 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 CROCCP2Q86T23 111 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 C12orf40Q86WS4 652 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 RALGPS2Q86X27 583 aaPredicted RBP13.84□□□□□ -0.19
VAPB-202ENST00000395802 SLC44A3Q8N4M1 653 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 PTCD2Q8WV60 388 aaKnown RBP13.84□□□□□ -0.19
VAPB-202ENST00000395802 ZBTB9Q96C00 473 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 SRPK1Q96SB4 655 aaKnown RBP13.84□□□□□ -0.19
VAPB-202ENST00000395802 SH3GL2Q99962 352 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 FICDQ9BVA6 458 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 ATP13A3Q9H7F0 1226 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 LHX3Q9UBR4 397 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 ACTL7AQ9Y615 435 aa13.84□□□□□ -0.19
VAPB-202ENST00000395802 LOC285095A0A1B0GVY8 99 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 SOCS5O75159 536 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 POP4O95707 220 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 MMP2P08253 660 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 ALADP13716 330 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 NFKBIAP25963 317 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 SERPINA4P29622 427 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 ADRA1AP35348 466 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 OPRD1P41143 372 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 SLC6A11P48066 632 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 EIF3BP55884 814 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 BCL2L1Q07817 233 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 PCSK7Q16549 785 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 CARD16Q5EG05 197 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 CASC4Q6P4E1 433 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 NCEH1Q6PIU2 408 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 ZNF534Q76KX8 674 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 NDUFAF2Q8N183 169 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 RYBPQ8N488 228 aaPredicted RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 FBXO36Q8NEA4 188 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 OR52K1Q8NGK4 314 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 KCNV2Q8TDN2 545 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 LRIG1Q96JA1 1093 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 P2RY13Q9BPV8 354 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 CPEB1Q9BZB8 566 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 ZC3H7BQ9UGR2 993 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 PLAAQ9Y263 795 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 NFS1Q9Y697 457 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 TEX264Q9Y6I9 313 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 K7ERQ8 282 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 RIPK2O43353 540 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 SMAD6O43541 496 aaKnown RBP13.83□□□□□ -0.2
VAPB-202ENST00000395802 AVILO75366 819 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 ABHD2P08910 425 aa13.83□□□□□ -0.2
VAPB-202ENST00000395802 OAS2P29728 719 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms