RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 LRIG1Q96JA1 1093 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 FEM1CQ96JP0 617 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 LHX3Q9UBR4 397 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 HPCAL4Q9UM19 191 aa18.3■□□□□ 0.52
CXCL12-204ENST00000395793 NBEAQ8NFP9 2946 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 LY6G6EA0A0G2JKS1 128 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 WASH4PA8MWX3 477 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 AREL1O15033 823 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 INSIG1O15503 277 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 POP4O95707 220 aaKnown RBP18.29■□□□□ 0.52
CXCL12-204ENST00000395793 MYF5P13349 255 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 ITIH2P19823 946 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 TARDBPQ13148 414 aaKnown RBP eCLIP18.29■□□□□ 0.52
CXCL12-204ENST00000395793 ZNF211Q13398 564 aaPredicted RBP18.29■□□□□ 0.52
CXCL12-204ENST00000395793 CA9Q16790 459 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 ZNF354CQ86Y25 554 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 ARFGAP1Q8N6T3 406 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 RAB7BQ96AH8 199 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 KLF15Q9UIH9 416 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 U3KQA8 63 aa18.29■□□□□ 0.52
CXCL12-204ENST00000395793 ZSCAN5CA6NGD5 496 aaPredicted RBP18.28■□□□□ 0.52
CXCL12-204ENST00000395793 LRRC53A6NM62 1247 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 TMCO5BA8MYB1 307 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 TSPAN6O43657 245 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 CDK4P11802 303 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 HNF1BP35680 557 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 YBEYP58557 167 aaPredicted RBP18.28■□□□□ 0.52
CXCL12-204ENST00000395793 INSM1Q01101 510 aaPredicted RBP18.28■□□□□ 0.52
CXCL12-204ENST00000395793 ILKQ13418 452 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 MAMLD1Q13495 774 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 SERINC3Q13530 473 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 PLEKHA7Q6IQ23 1121 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 DCUN1D2Q6PH85 259 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 GDPD4Q6W3E5 623 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 TMC6Q7Z403 805 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 UMODL1-AS1Q8N2C9 162 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 RFFLQ8WZ73 363 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 IFT43Q96FT9 208 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 EXOC2Q96KP1 924 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 GDAP1L1Q96MZ0 367 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 LENG8Q96PV6 779 aaPredicted RBP18.28■□□□□ 0.52
CXCL12-204ENST00000395793 PEBP4Q96S96 227 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 EPAS1Q99814 870 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 TRIM7Q9C029 511 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 TTYH3Q9C0H2 523 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 PDFQ9HBH1 243 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 DNAJC28Q9NX36 388 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 MYO6Q9UM54 1294 aa18.28■□□□□ 0.52
CXCL12-204ENST00000395793 SPTY2D1-AS1A0A0U1RR47 76 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 ANKRD62A6NC57 917 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 NEBLO76041 1014 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 TNFAIP3P21580 790 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 IGFALSP35858 605 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 PFN3P60673 137 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 RHOAP61586 193 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 CYTH1Q15438 398 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 INO80DQ53TQ3 878 aaPredicted RBP18.27■□□□□ 0.52
CXCL12-204ENST00000395793 CYP4V2Q6ZWL3 525 aaPredicted RBP18.27■□□□□ 0.52
CXCL12-204ENST00000395793 ZNF571Q7Z3V5 609 aaPredicted RBP18.27■□□□□ 0.52
CXCL12-204ENST00000395793 FAM174AQ8TBP5 190 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 HNRNPLLQ8WVV9 542 aaKnown RBP18.27■□□□□ 0.52
CXCL12-204ENST00000395793 ASB12Q8WXK4 309 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 BPIFA3Q9BQP9 254 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 OSBPL1AQ9BXW6 950 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 LRRC19Q9H756 370 aa18.27■□□□□ 0.52
CXCL12-204ENST00000395793 PNMA8BQ9ULN7 279 aaPredicted RBP18.27■□□□□ 0.52
CXCL12-204ENST00000395793 LRP4O75096 1905 aa18.27■□□□□ 0.51
CXCL12-204ENST00000395793 ASXL3Q9C0F0 2248 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 NEMP1O14524 444 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 PIGNO95427 931 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 IGSF6O95976 241 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 NME1P15531 152 aaKnown RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 TIMP2P16035 220 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 RABIFP47224 123 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 AIF1P55008 147 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 TPI1P60174 286 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 DAB2P98082 770 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 EIF2B5Q13144 721 aaKnown RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 SGCGQ13326 291 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 PDE1CQ14123 709 aaPredicted RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 PARP15Q460N3 678 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 DCP2Q8IU60 420 aaKnown RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 DENND6BQ8NEG7 585 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 ZNF548Q8NEK5 533 aaPredicted RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 CASKIN2Q8WXE0 1202 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 CENPTQ96BT3 561 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 NXPE2Q96DL1 559 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 CRELD1Q96HD1 420 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 CELF6Q96J87 481 aaKnown RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 VCPIP1Q96JH7 1222 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 APOLD1Q96LR9 279 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 KCTD15Q96SI1 283 aaPredicted RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 SNRNP25Q9BV90 132 aaKnown RBP18.26■□□□□ 0.51
CXCL12-204ENST00000395793 HAUS4Q9H6D7 363 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 CATSPERBQ9H7T0 1116 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 AP4E1Q9UPM8 1137 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 MFHAS1Q9Y4C4 1052 aa18.26■□□□□ 0.51
CXCL12-204ENST00000395793 J3KR12 359 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms