RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 NETO2Q8NC67 525 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 USP13Q92995 863 aaPredicted RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 FATE1Q969F0 183 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 LRRC45Q96CN5 670 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 P2RY11Q96G91 374 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 ZSWIM3Q96MP5 696 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 SLC39A8Q9C0K1 460 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 NEUROG2Q9H2A3 272 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 PIDD1Q9HB75 910 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 TDP1Q9NUW8 608 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 UBP1Q9NZI7 540 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CFAP97Q9P2B7 532 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 LSM7Q9UK45 103 aaKnown RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 MRPS23Q9Y3D9 190 aaKnown RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 CLDN11O75508 207 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 DLGAP3O95886 979 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 IRF1P10914 325 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 PLTPP55058 493 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CAV1Q03135 178 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 AP1B1Q10567 949 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 WASHC5Q12768 1159 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 GPS1Q13098 491 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 HEATR6Q6AI08 1181 aaKnown RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 ANKRD54Q6NXT1 300 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 SYCE2Q6PIF2 218 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 RHBDF2Q6PJF5 856 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CFAP52Q8N1V2 620 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CCNYQ8ND76 341 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 ITFG1Q8TB96 612 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 FBXO25Q8TCJ0 367 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 SREK1Q8WXA9 508 aaKnown RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 CAVIN3Q969G5 261 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 CELF6Q96J87 481 aaKnown RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 PRICKLE1Q96MT3 831 aaPredicted RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 FERMT1Q9BQL6 677 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 ARFGAP3Q9NP61 516 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 PAK5Q9P286 719 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 CCL26Q9Y258 94 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
RTN1-203ENST00000395090 ZFP37Q9Y6Q3 630 aaPredicted RBP11.64□□□□□ -0.55
RTN1-203ENST00000395090 FAM221AA4D161 298 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 DNALI1O14645 258 aaPredicted RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 NDC80O14777 642 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 MAFKO60675 156 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 FAM153BP0C7A2 387 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 CEBPBP17676 345 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 OR1E1P30953 314 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 CHKAP35790 457 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 PAPOLAP51003 745 aaKnown RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 RPS24P62847 133 aaKnown RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 CALCOCO2Q13137 446 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 HLTFQ14527 1009 aaKnown RBP eCLIP11.63□□□□□ -0.55
RTN1-203ENST00000395090 PARP15Q460N3 678 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 FAM153CQ494X1 144 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 MPP7Q5T2T1 576 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 RNASEH2BQ5TBB1 312 aaKnown RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 RNF43Q68DV7 783 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 HIBCHQ6NVY1 386 aaPredicted RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 TFAP2DQ7Z6R9 452 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 PCGF5Q86SE9 256 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 SETD3Q86TU7 594 aaPredicted RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 CCDC13Q8IYE1 715 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 TMA16Q96EY4 203 aaKnown RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 SCARF2Q96GP6 870 aaPredicted RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 SPATA13Q96N96 652 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 VAT1Q99536 393 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 TTYH1Q9H313 450 aaPredicted RBP11.63□□□□□ -0.55
RTN1-203ENST00000395090 FAM153AQ9UHL3 310 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 ANAPC5Q9UJX4 755 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 SH3BP1Q9Y3L3 701 aa11.63□□□□□ -0.55
RTN1-203ENST00000395090 A0A1B0GVM2 712 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 TCAF2A6NFQ2 919 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 RASA4BC9J798 803 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 MATN3O15232 486 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 LINC01565O15544 149 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 RASA4O43374 803 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 OPHN1O60890 802 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 WISP1O95388 367 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 BPNT1O95861 308 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 ACTN2P35609 894 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 MAGEA6P43360 314 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 VPS41P49754 854 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 SGSHP51688 502 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 ITGA8P53708 1063 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 CBX2Q14781 532 aaPredicted RBP11.62□□□□□ -0.55
RTN1-203ENST00000395090 MORF4L2Q15014 288 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 TEX44Q53QW1 395 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 ANKRD20A2Q5SQ80 823 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 RARS2Q5T160 578 aaKnown RBP11.62□□□□□ -0.55
RTN1-203ENST00000395090 ANKRD20A1Q5TYW2 823 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 ANKRD20A3Q5VUR7 823 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 HOOK3Q86VS8 718 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 ARID3BQ8IVW6 561 aaPredicted RBP11.62□□□□□ -0.55
RTN1-203ENST00000395090 BBS7Q8IWZ6 715 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 RIN3Q8TB24 985 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 CCDC110Q8TBZ0 833 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 TXLNGYQ9BZA5 131 aa11.62□□□□□ -0.55
RTN1-203ENST00000395090 MRPL18Q9H0U6 180 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms