RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 MFSD6LQ8IWD5 586 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 AHI1Q8N157 1196 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 TOP6BLQ8N6T0 577 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 CNTD1Q8N815 330 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 KDM1BQ8NB78 822 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 DLG3Q92796 817 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 DTNBP1Q96EV8 351 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 MPP4Q96JB8 637 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 SRRDQ9UH36 339 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 Q9Y3F1 56 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 C9IYK1 514 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 HAS3O00219 553 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 XPOTO43592 962 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 SH3BGRP55822 239 aaPredicted RBP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 GJA9P57773 515 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 NADK2Q4G0N4 442 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 C6orf52Q5T4I8 152 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 NAPEPLDQ6IQ20 393 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 OTOP3Q7RTS5 596 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 GPRIN1Q7Z2K8 1008 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 LCA5Q86VQ0 697 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 CEP97Q8IW35 865 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 PDCD6IPQ8WUM4 868 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 NXNL1Q96CM4 212 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 TMA16Q96EY4 203 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 GPR78Q96P69 363 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 VAT1Q99536 393 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 MRPS26Q9BYN8 205 aaKnown RBP18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 APPL1Q9UKG1 709 aa18.57■□□□□ 0.56
PCDHA1-202ENST00000394633 MYOCOSA0A1B0GUC4 107 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 SEPT4O43236 478 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 VAPBO95292 243 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 COL6A2P12110 1019 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 IGFBP6P24592 240 aaPredicted RBP18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 PSEN2P49810 448 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 MPP1Q00013 466 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 GNASQ5JWF2 1037 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 WSCD1Q658N2 575 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 DENND6AQ8IWF6 608 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 GALNT4Q8N4A0 578 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 CCNYL1Q8N7R7 359 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 TMEM102Q8N9M5 508 aaPredicted RBP18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 FAM156AQ8NDB6 213 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 UNKQ9C0B0 810 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 ZNF696Q9H7X3 374 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 DDIT4Q9NX09 232 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 PTTG2Q9NZH5 202 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 PIN4Q9Y237 131 aaKnown RBP18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 ACOT9Q9Y305 439 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 SCN10AQ9Y5Y9 1956 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 THSD7BQ9C0I4 1608 aa18.56■□□□□ 0.56
PCDHA1-202ENST00000394633 SDHDO14521 159 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 TNFAIP8O95379 198 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 FAM200BP0CF97 657 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 NCAM1P13591 858 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 CXCL17Q6UXB2 119 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 SPATA6LQ8N4H0 392 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 USP33Q8TEY7 942 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 CELF6Q96J87 481 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 OMDQ99983 421 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 GRIP2Q9C0E4 1043 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 RBM38Q9H0Z9 239 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 PLK2Q9NYY3 685 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 RNASEH2AO75792 299 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 RAB10P61026 200 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 CTBP1Q13363 440 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 MAP7Q14244 749 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 PRPSAP1Q14558 356 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 UBXN11Q5T124 520 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 IYDQ6PHW0 289 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 ARRDC4Q8NCT1 418 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 SPATA22Q8NHS9 363 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 TMEM40Q8WWA1 233 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 PGAP3Q96FM1 320 aaPredicted RBP18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 MAELQ96JY0 434 aaKnown RBP18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 SUDS3Q9H7L9 328 aaPredicted RBP18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 CRTAC1Q9NQ79 661 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 TANC1Q9C0D5 1861 aa18.55■□□□□ 0.56
PCDHA1-202ENST00000394633 TREHO43280 583 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 ATP6V1B1P15313 513 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 TCN1P20061 433 aaPredicted RBP18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 CLCN2P51788 898 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 ADAM17P78536 824 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 PKN3Q6P5Z2 889 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 KLHDC10Q6PID8 442 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 GK5Q6ZS86 529 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 CNTN4Q8IWV2 1026 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 KLHDC8BQ8IXV7 354 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 EZH1Q92800 747 aaPredicted RBP18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 ZFRQ96KR1 1074 aaKnown RBP18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 SMOQ99835 787 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 COLEC11Q9BWP8 271 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 TMEM30AQ9NV96 361 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 FAM95CA0A1B0GW59 222 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 MBLAC1A4D2B0 266 aaPredicted RBP18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 KCNU1A8MYU2 1149 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 AP3B1O00203 1094 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 TRIM38O00635 465 aa18.54■□□□□ 0.56
PCDHA1-202ENST00000394633 NPHS1O60500 1241 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms