RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 PFKPQ01813 784 aa16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 AARS2Q5JTZ9 985 aaKnown RBP16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 TSTD2Q5T7W7 516 aa16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 ZNF280DQ6N043 979 aa16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 TXNDC5Q8NBS9 432 aaKnown RBP16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 SPPL2BQ8TCT7 592 aa16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 ADI1Q9BV57 179 aa16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 NPLQ9BXD5 320 aaPredicted RBP16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 ASB7Q9H672 318 aa16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 TNFRSF12AQ9NP84 129 aa16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 NCKIPSDQ9NZQ3 722 aa16.59■□□□□ 0.25
EFEMP1-202ENST00000394555 EVPLQ92817 2033 aa16.58■□□□□ 0.25
EFEMP1-202ENST00000394555 FUOMA2VDF0 154 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 K7EPI3 171 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 EEF2KO00418 725 aaKnown RBP16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 SRP72O76094 671 aaKnown RBP16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 SNRPB2P08579 225 aaKnown RBP16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 TSPAN8P19075 237 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 ATP6V1B2P21281 511 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 GABRB3P28472 473 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 C1QTNF8P60827 252 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 METTL7BQ6UX53 244 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 SPPL2CQ8IUH8 684 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 BORCS5Q969J3 196 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 MUC3BQ9H195 1237 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 SOX17Q9H6I2 414 aaPredicted RBP16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 ANKRD6Q9Y2G4 727 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 ARIH2O95376 493 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 HSPA1AP0DMV8 641 aaKnown RBP16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 HSPA1BP0DMV9 641 aaKnown RBP16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 RXRGP48443 463 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 ZNF829Q3KNS6 432 aaPredicted RBP16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 ANKRD52Q8NB46 1076 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 LRCH3Q96II8 777 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 FTHL17Q9BXU8 183 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 CHST12Q9NRB3 414 aa16.58■□□□□ 0.24
EFEMP1-202ENST00000394555 ZNF638Q14966 1978 aaKnown RBP16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 C9JVG2 144 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 FAM72CH0Y354 149 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 PGK1P00558 417 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 HSPA8P11142 646 aaKnown RBP16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 NFKB1P19838 968 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 YWHAQP27348 245 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 TRAF2Q12933 501 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 RAB39AQ14964 217 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 SAMD4BQ5PRF9 694 aaKnown RBP16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 C1QTNF12Q5T7M4 302 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 FAM72AQ5TYM5 149 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 FAM72DQ6L9T8 149 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 NANOGP8Q6NSW7 305 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 DCDC5Q6ZRR9 648 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 FAM72BQ86X60 149 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 ZDHHC17Q8IUH5 632 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 CENPSQ8N2Z9 138 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 TBC1D15Q8TC07 691 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 MLPHQ9BV36 600 aaPredicted RBP16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 OSBPL2Q9H1P3 480 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 RHOJQ9H4E5 214 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 CASS4Q9NQ75 786 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 NUP205Q92621 2012 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 IGKV6-21A0A0C4DH24 114 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 M0QYT0 321 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 FUCA1P04066 466 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 ARF4P18085 180 aaPredicted RBP16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 MERTKQ12866 999 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 TRAP1Q12931 704 aaKnown RBP16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 CAMK1DQ8IU85 385 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 PELI3Q8N2H9 469 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 SHCBP1Q8NEM2 672 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 DNERQ8NFT8 737 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 OR2T34Q8NGX1 318 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 OR2T3Q8NH03 318 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 TRIM8Q9BZR9 551 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 FBRSL1Q9HCM7 1045 aaKnown RBP16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 SETD4Q9NVD3 440 aa16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 TRNAU1APQ9NX07 287 aaKnown RBP16.57■□□□□ 0.24
EFEMP1-202ENST00000394555 NRP2O60462 931 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 ZNF182P17025 639 aaPredicted RBP16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 CXCL9Q07325 125 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 MAPRE2Q15555 327 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 ANKFN1Q8N957 763 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 USP33Q8TEY7 942 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 PHF21BQ96EK2 531 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 RPL10LQ96L21 214 aaKnown RBP16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 PRMT7Q9NVM4 692 aaPredicted RBP16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 CD300AQ9UGN4 299 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 ADAMTS5Q9UNA0 930 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 FAM155AB1AL88 458 aaPredicted RBP16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 TARM1B6A8C7 271 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 DLGAP1O14490 977 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 CLOCKO15516 846 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 SERPINB7O75635 380 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 VTNP04004 478 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 STMN1P16949 149 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 CD68P34810 354 aaPredicted RBP16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 PRKAA2P54646 552 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 GJA9P57773 515 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 TNFAIP2Q03169 654 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 PLCL1Q15111 1095 aa16.56■□□□□ 0.24
EFEMP1-202ENST00000394555 ERMP1Q7Z2K6 904 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms