RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 DESI1Q6ICB0 168 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 KCTD20Q7Z5Y7 419 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 KIF18BQ86Y91 864 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 RCOR2Q8IZ40 523 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SMG8Q8ND04 991 aaKnown RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 HCAR2Q8TDS4 363 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SGCDQ92629 289 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 BDH2Q9BUT1 245 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 NPLQ9BXD5 320 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 CD320Q9NPF0 282 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 MAD2L2Q9UI95 211 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 MRPL11Q9Y3B7 192 aaKnown RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 MAU2Q9Y6X3 613 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 RGPD1P0DJD0 1748 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 IGSF9BQ9UPX0 1349 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 A0A1B0GW55 424 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 FAM149AA5PLN7 773 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PRSS44E7EML9 344 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 GSTA4O15217 222 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 INPP4BO15327 924 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DYNC1LI2O43237 492 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SCO1O75880 301 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 OR2B3O76000 313 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PDGFAP04085 211 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DUX4L2P0CJ85 424 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DUX4L3P0CJ86 424 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DUX4L4P0CJ87 422 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DUX4L5P0CJ88 424 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DUX4L6P0CJ89 424 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DUX4L7P0CJ90 424 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 CD247P20963 164 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 KCNA5P22460 613 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 GCLMP48507 274 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ARHGDIAP52565 204 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 HK2P52789 917 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ABCE1P61221 599 aaKnown RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 IL5RAQ01344 420 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SMARCB1Q12824 385 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 NFX1Q12986 1120 aaKnown RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ANGPT1Q15389 498 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 AGAP6Q5VW22 663 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 P2RY8Q86VZ1 359 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PGAM4Q8N0Y7 254 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF366Q8N895 744 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 GIMAP1Q8WWP7 306 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 LPGAT1Q92604 370 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SH3KBP1Q96B97 665 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 AGAP4Q96P64 663 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 BEX2Q9BXY8 128 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ERVMER34-1Q9H9K5 563 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SMPD3Q9NY59 655 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DUX4Q9UBX2 424 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 CDH7Q9ULB5 785 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PCDHA6Q9UN73 950 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SNX7Q9UNH6 387 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ABCG2Q9UNQ0 655 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PLLPQ9Y342 182 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PCDHA8Q9Y5H6 950 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 CNTNAP5Q8WYK1 1306 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 LOC100506127A0A0U1RQW1 187 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 A0A1B0GTW7 788 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 RGS13O14921 159 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PROS1P07225 676 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 BPGMP07738 259 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 OSBPP22059 807 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SLC26A3P40879 764 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ENPEPQ07075 957 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 BTBD16Q32M84 506 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 LRIT3Q3SXY7 679 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 VWA5B1Q5TIE3 1220 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PRAMEF18Q5VWM3 479 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 SLX4IPQ5VYV7 408 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 TTC23Q5W5X9 447 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DCAF15Q66K64 600 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 RASAL3Q86YV0 1011 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 LSMEM2Q8N112 164 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ZFP90Q8TF47 636 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 HEXIM2Q96MH2 286 aaKnown RBP7.7□□□□□ -1.18
VTI1A-201ENST00000393077 RANBP9Q96S59 729 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 CLPBQ9H078 707 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 PCDHB16Q9NRJ7 776 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 KCTD5Q9NXV2 234 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 RDH8Q9NYR8 311 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 DNPEPQ9ULA0 475 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 ING4Q9UNL4 249 aa7.7□□□□□ -1.18
VTI1A-201ENST00000393077 KAT6AQ92794 2004 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 KBTBD13C9JR72 458 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 NKRFO15226 690 aaKnown RBP eCLIP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 SLC16A3O15427 465 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CSDE1O75534 798 aaKnown RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 OR5F1O95221 314 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 TP53P04637 393 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CD48P09326 243 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 ETS1P14921 441 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 DCKP27707 260 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 GSTM2P28161 218 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CAPGP40121 348 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 PCDH1Q08174 1060 aa7.69□□□□□ -1.18
VTI1A-201ENST00000393077 CYP51A1Q16850 503 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms