RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TFAP2DQ7Z6R9 452 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 CLIP4Q8N3C7 705 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 CCDC115Q96NT0 180 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 CADM1Q9BY67 442 aaKnown RBP16.29■□□□□ 0.2
SHANK1-204ENST00000391814 CCNB1IP1Q9NPC3 277 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 PLCL2Q9UPR0 1127 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 KCNK1O00180 336 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 PRRG1O14668 218 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 ITGAVP06756 1048 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 RHAGQ02094 409 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
SHANK1-204ENST00000391814 GLIS3Q8NEA6 775 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 ABCG8Q9H221 673 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 SCAF8Q9UPN6 1271 aaKnown RBP16.29■□□□□ 0.2
SHANK1-204ENST00000391814 SAGE2PA6NJ88 616 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 AGPSO00116 658 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 ALDH1A2O94788 518 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 BMP6P22004 513 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 EFEMP1Q12805 493 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 ATP13A4Q4VNC1 1196 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 REP15Q6BDI9 236 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 NELL1Q92832 810 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 ACP6Q9NPH0 428 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 DNAJC28Q9NX36 388 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 MAGEC1O60732 1142 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 SREBF1P36956 1147 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 ADIGQ0VDE8 80 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 MEIOBQ8N635 442 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 SLC35C1Q96A29 364 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 VCPIP1Q96JH7 1222 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 FRMD6Q96NE9 622 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 RASSF1Q9NS23 344 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 CATSPERZQ9NTU4 200 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 EXD2Q9NVH0 621 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 PCDHGA10Q9Y5H3 936 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 PGK1P00558 417 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 UMPSP11172 480 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 HPGDP15428 266 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 FSTL1Q12841 308 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 ADAM32Q8TC27 787 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 CERS2Q96G23 380 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 UCKL1Q9NWZ5 548 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 MPSTP25325 297 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 NDST1P52848 882 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 MCOLN3Q8TDD5 553 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 TRHDEQ9UKU6 1024 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 FAM50BQ9Y247 325 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 F9P00740 461 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 CXCL8P10145 99 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 NUDT18Q6ZVK8 323 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 SH3RF1Q7Z6J0 888 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 OOSP2Q86WS3 158 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 PJA1Q8NG27 643 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 ZFP14Q9HCL3 533 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 SNX15Q9NRS6 342 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 OPTCQ9UBM4 332 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 UBQLN1Q9UMX0 589 aaKnown RBP16.28■□□□□ 0.2
SHANK1-204ENST00000391814 H3BMM5 538 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 BCKDKO14874 412 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 VTNP04004 478 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 CYP1A1P04798 512 aaPredicted RBP16.28■□□□□ 0.2
SHANK1-204ENST00000391814 SEC23AQ15436 765 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 THAP5Q7Z6K1 395 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 PEG10Q86TG7 708 aaKnown RBP16.28■□□□□ 0.2
SHANK1-204ENST00000391814 C12orf56Q8IXR9 622 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 OR2T34Q8NGX1 318 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 OR2T3Q8NH03 318 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 PRKD2Q9BZL6 878 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 CAB39LQ9H9S4 337 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 SPACA6W5XKT8 324 aa16.28■□□□□ 0.2
SHANK1-204ENST00000391814 SALL1Q9NSC2 1324 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 FAM149AA5PLN7 773 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 FAM172BPA6NC97 362 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 ITGA2BP08514 1039 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 FGRP09769 529 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 PDCD4Q53EL6 469 aaKnown RBP16.27■□□□□ 0.2
SHANK1-204ENST00000391814 GALNT6Q8NCL4 622 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 IRF2BPLQ9H1B7 796 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 NKIRAS2Q9NYR9 191 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 GNPTGQ9UJJ9 305 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 ALKQ9UM73 1620 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 DHFRP00374 187 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 NTRK1P04629 796 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 HGFP14210 728 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 SMU1Q2TAY7 513 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 IQCKQ8N0W5 287 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 SAMD3Q8N6K7 520 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 POF1BQ8WVV4 589 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 AGO4Q9HCK5 861 aaKnown RBP16.27■□□□□ 0.2
SHANK1-204ENST00000391814 FAM240BA0A1B0GVZ2 78 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 CBX4O00257 560 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 CCSAPQ6IQ19 270 aaPredicted RBP16.27■□□□□ 0.2
SHANK1-204ENST00000391814 ZNF655Q8N720 491 aaPredicted RBP16.27■□□□□ 0.2
SHANK1-204ENST00000391814 HSPBAP1Q96EW2 488 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 ADGRE2Q9UHX3 823 aa16.27■□□□□ 0.2
SHANK1-204ENST00000391814 ZNF879B4DU55 563 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 HBP1O60381 514 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 TCEA3O75764 348 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 HLA-DQA2P01906 255 aa16.27■□□□□ 0.19
SHANK1-204ENST00000391814 BPGMP07738 259 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms