RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 TRIM50Q86XT4 487 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 PTRH1Q86Y79 214 aaKnown RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ANKRD13BQ86YJ7 626 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 PHYKPLQ8IUZ5 450 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CDKL3Q8IVW4 592 aaPredicted RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SP8Q8IXZ3 490 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CMTR2Q8IYT2 770 aaKnown RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TNS4Q8IZW8 715 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SLC7A5P1Q8MH63 180 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CBR4Q8N4T8 237 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TRIML2Q8N7C3 387 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 KIAA1958Q8N8K9 716 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ATP6V0D2Q8N8Y2 350 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ANKRD52Q8NB46 1076 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MINDY2Q8NBR6 621 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TXNDC5Q8NBS9 432 aaKnown RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MCPH1Q8NEM0 835 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ANKK1Q8NFD2 765 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 REPS2Q8NFH8 660 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 OR2T34Q8NGX1 318 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 OR2T3Q8NH03 318 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ZSCAN18Q8TBC5 510 aaPredicted RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 RDH11Q8TC12 318 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SPPL2BQ8TCT7 592 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 BPIFB1Q8TDL5 484 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 LRRN4Q8WUT4 740 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 AFG1LQ8WV93 481 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CANT1Q8WVQ1 401 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 RXFP2Q8WXD0 754 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CENPIQ92674 756 aaPredicted RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MUL1Q969V5 352 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TAMM41Q96BW9 452 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MFSD3Q96ES6 412 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CCDC97Q96F63 343 aaPredicted RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CERS2Q96G23 380 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 VMP1Q96GC9 406 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SH3YL1Q96HL8 342 aaPredicted RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TXNDC15Q96J42 360 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 WNK4Q96J92 1243 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MARK4Q96L34 752 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 DHRS1Q96LJ7 313 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MYRFLQ96LU7 910 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 NSMCE3Q96MG7 304 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SPATA13Q96N96 652 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TAAR1Q96RJ0 339 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SIGLEC11Q96RL6 698 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ZNF347Q96SE7 839 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TBCBQ99426 244 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 GPR22Q99680 433 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 APBA2Q99767 749 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 PDCD2LQ9BRP1 358 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TARS2Q9BW92 718 aaKnown RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 NIFKQ9BYG3 293 aaKnown RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ALOXE3Q9BYJ1 711 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 YTHDF1Q9BYJ9 559 aaKnown RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MAGEB5Q9BZ81 275 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 GLIS2Q9BZE0 524 aaPredicted RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MTMR12Q9C0I1 747 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 DNAI2Q9GZS0 605 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 HOXD1Q9GZZ0 328 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 LHPPQ9H008 270 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 NACA2Q9H009 215 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 PORCNQ9H237 461 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SEMA6AQ9H2E6 1030 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SMARCAD1Q9H4L7 1026 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 TMEM134Q9H6X4 195 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CAAP1Q9H8G2 361 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 POLR1BQ9H9Y6 1135 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MEAF6Q9HAF1 191 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 VTA1Q9NP79 307 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CASS4Q9NQ75 786 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ACSS2Q9NR19 701 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 PXMP2Q9NR77 195 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 FBXO8Q9NRD0 319 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SACM1LQ9NTJ5 587 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 DTLQ9NZJ0 730 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 IFT80Q9P2H3 777 aaPredicted RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ANKMY1Q9P2S6 941 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 MORF4L1Q9UBU8 362 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 PCSK1NQ9UHG2 260 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 BCAP29Q9UHQ4 241 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 ENPP5Q9UJA9 477 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CPSF3Q9UKF6 684 aaKnown RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 FZD1Q9UP38 647 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 AGTPBP1Q9UPW5 1226 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CTDP1Q9Y5B0 961 aaPredicted RBP3.49□□□□□ -1.85
TRAV39-201ENST00000390466 SPO11Q9Y5K1 396 aa3.49□□□□□ -1.85
TRAV39-201ENST00000390466 CKAP5Q14008 2032 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 A0A096LPK6 155 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 IGKV6D-21A0A0A0MT36 114 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 E2F8A0AVK6 867 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CCDC78A2IDD5 438 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 ASPDHA6ND91 283 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 SAC3D1A6NKF1 404 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 AQP12BA6NM10 295 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CLDN25C9JDP6 229 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 CFAP99D6REC4 459 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 H0YAE9 185 aa3.48□□□□□ -1.85
TRAV39-201ENST00000390466 POLRMTO00411 1230 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms