RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 CABYRO75952 493 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 TGFB3P10600 412 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 ZNF12P17014 697 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 ZNF484Q5JVG2 852 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 TMEM26Q6ZUK4 368 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 NCCRP1Q6ZVX7 275 aaPredicted RBP14.39□□□□□ -0.11
RTF1-201ENST00000389629 ZNF410Q86VK4 478 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 SMYD1Q8NB12 490 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 ELMO1Q92556 727 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 IL22Q9GZX6 179 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 HMGXB4Q9UGU5 601 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 BTRCQ9Y297 605 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 CRYL1Q9Y2S2 319 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 PHRF1Q9P1Y6 1649 aaKnown RBP14.39□□□□□ -0.11
RTF1-201ENST00000389629 A0A1W2PPW3 197 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 DPEP1P16444 411 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 YBX3P16989 372 aaKnown RBP eCLIP14.39□□□□□ -0.117e-8■□□□□ 8.2
RTF1-201ENST00000389629 ST13P50502 369 aaKnown RBP14.39□□□□□ -0.11
RTF1-201ENST00000389629 OGFOD2Q6N063 350 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 PMF1Q6P1K2 205 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 PIWIL4Q7Z3Z4 852 aaKnown RBP14.39□□□□□ -0.11
RTF1-201ENST00000389629 OR6J1Q8NGC5 347 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 ADI1Q9BV57 179 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 APOL5Q9BWW9 433 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 S100A1P23297 94 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 ATP5F1P24539 256 aaPredicted RBP14.39□□□□□ -0.11
RTF1-201ENST00000389629 GRIK1P39086 918 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 CCT8P50990 548 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 ATXN1P54253 815 aaKnown RBP14.39□□□□□ -0.11
RTF1-201ENST00000389629 TPTEP56180 551 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 PYROXD2Q8N2H3 581 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 DQX1Q8TE96 717 aaKnown RBP14.39□□□□□ -0.11
RTF1-201ENST00000389629 PPP1R14BQ96C90 147 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 CHID1Q9BWS9 393 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 EPS8L2Q9H6S3 715 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 IMPAD1Q9NX62 359 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 GIN1Q9NXP7 522 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 TUBA8Q9NY65 449 aaPredicted RBP14.39□□□□□ -0.11
RTF1-201ENST00000389629 IDH3BO43837 385 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 MFSD11O43934 449 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 SOAT2O75908 522 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 MED26O95402 600 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 LTFP02788 710 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 HMBSP08397 361 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 DBTP11182 482 aaKnown RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 PNPLA4P41247 253 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 OAZ1P54368 228 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 CCNIQ14094 377 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 NR6A1Q15406 480 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 KLHL35Q6PF15 583 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 AFG1LQ8WV93 481 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 COPS5Q92905 334 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 MFSD3Q96ES6 412 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 TRHDEQ9UKU6 1024 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 RAD54BQ9Y620 910 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 SIPA1L3O60292 1781 aaPredicted RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 B4GALT4O60513 344 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 CYP2C9P11712 490 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 ALDH4A1P30038 563 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 ASPAP45381 313 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 HK2P52789 917 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 GJC2Q5T442 439 aaPredicted RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 SZRD1Q7Z422 152 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 KIAA0319LQ8IZA0 1049 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 TAGAPQ8N103 731 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 OR2T34Q8NGX1 318 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 OR2T3Q8NH03 318 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 HES2Q9Y543 173 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 TIMM13Q9Y5L4 95 aaPredicted RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 SYNCRIPO60506 623 aaKnown RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 PDCD4Q53EL6 469 aaKnown RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 FKBP1CQ5VVH2 108 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 FSTL4Q6MZW2 842 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 C12orf43Q96C57 262 aaKnown RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 STRA6Q9BX79 667 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 LATS2Q9NRM7 1088 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 SETD4Q9NVD3 440 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 SNPHO15079 494 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 GCAP28676 217 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 PPM1FP49593 454 aaPredicted RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 KRR1Q13601 381 aaKnown RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 PFKFB4Q16877 469 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 KCTD15Q96SI1 283 aaPredicted RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 MRPL45Q9BRJ2 306 aaKnown RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 SEMA4BQ9NPR2 832 aaPredicted RBP14.38□□□□□ -0.11
RTF1-201ENST00000389629 WDR37Q9Y2I8 494 aa14.38□□□□□ -0.11
RTF1-201ENST00000389629 GCATO75600 419 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 ERCC2P18074 760 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 MAGEA8P43361 318 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 TTC23Q5W5X9 447 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 LCLAT1Q6UWP7 414 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 PAGE2Q7Z2X7 111 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 EID3Q8N140 333 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 CCDC106Q9BWC9 280 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 PKP3Q9Y446 797 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 CACNA1SQ13698 1873 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 DYNC1LI2O43237 492 aaPredicted RBP14.37□□□□□ -0.11
RTF1-201ENST00000389629 RFPL1O75677 317 aa14.37□□□□□ -0.11
RTF1-201ENST00000389629 F9P00740 461 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms